Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1828 ATGGTTGATCTACTAGGACGTGCCGGACAAATCGATGAAGCTAGCGAAATAGTAGAAACTATTCCCTTTAAGCCAGATGCCAGGGTTTATGGCCCCCTGCTGAGTGCTTGTAAGTTACACTCAGAGACTCATTTTGCAGAAATTGCTGCTCAGAAGCTTATAAATATGGAACCTAAAAATGCTGGAAACTATGTGTTGCTTTCCAATATATATGCTGCAGCAAGAAAGTGGGAAAAAGTTGCTCAAATGAGGAGTTTTCTTAGAGACAAAGGAATAAAGAAAATACCTGGTTGCAGCTGGCTAGAATTAAATGGACAAGTACATGAGTTTCGTGTTGCTGATCAATCTCATCCAAGATCGAAAGATATATATTCAGTATGA 381 0.3937 MVDLLGRAGQIDEASEIVETIPFKPDARVYGPLLSACKLHSETHFAEIAAQKLINMEPKNAGNYVLLSNIYAAARKWEKVAQMRSFLRDKGIKKIPGCSWLELNGQVHEFRVADQSHPRSKDIYSV* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1828 126 Gene3D Tetratricopeptide repeat domain 1 121 IPR011990 GO:0005515
Aev04g1828 126 Pfam E motif 40 102 IPR046848 -
Aev04g1828 126 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 126 - -
Aev04g1828 126 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1828 Aev-Chr4 14540694 14541074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1828 1 124 Glycoside Hydrolase AT3G49170 41.935 1.40e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1828 - - ahf:112732293 235.343