Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1562 ATGAAAACCATGAATAAGTTGATAGGAGCAAAGGACCTTCCTGTGAAGGAGTCTTATGTGAAGCTTAAGCTTGGGAGGTTTAAGTCTAAGACTAGAATATTGAGGAACACTTGCGACCCTGTTTGGAATGAAGAGTTTGCTTTCAGAGTGCATGATTTGGAGCAAGTGCTTGTTGTGTCTGTTGTTAATCATCATCACAGTGATGAGTTGAGGATCATCAATGGTGGGTCTGTGGATATTGTTGGTGAAGTGAGGGTTCTTGTAGGTTCAGTTGCTTCTGTGGATAAACAAACATTGCCACCTACTTGGTTCTCTCTTGTTAGTCCCAAGACTGGAAAATTTTTCAACAAATATTGTGGAAAAATTCTCCTTACCATTTCTCTTCATAGTAAGGGCCATTCCAATCACACAAATTCTAATAACTCAACTTTTGCAATTGAGGATTCAAGAGACTTGGAAGGTGTTTCATCTCAATCCCTTTCTAGTAAAATGGGTGAAAGCAAACAGTTGCTAAAGGTAATTACTAGTCGTTTAGATAGGATTTTCAACAAGAAAGAAGGAAGCTCAAAATCCGAAGATTCTTCAGAACAATCCAATTTTTTCTCTGATTCTGAAGATTGTGTACATGAAGATTCATCATCTACTTGTAACTTTGAAGAAGCCATTGCACAGATGGAGGCAGGAGATAGCAAACCAGAAATGCCTGAAAATTTGCAGGGTGGTGTTCTGTTGGATCAGATTTTTGTCGTATCTCCGTATGATCTTAATGCATTCCTTTTTGCACCAAATTCACAGTTCAGGAAAGATTTAGCAGAACTTCAAGGTACAACAAATGTTCAAGAGGGGCCTTGGATGTGGAAACCCGGAGACACACCACGTTTATCGCGAGTTGTTTCATATACAAAAGCTGCTTCAAAACTAGTCAAGGCTATTAATGCCTCTGAGGAGCAAACATATGTTAGAGTGGCTAAGGATGAATTTGCTGTGCTTGTTAGTGTAAGCACACCTGAGGTCCCATATGGGAATACATTTCGGGTCGAATTGCTTTATAAGATAATGCCGGGAGGAGAGCTATGTTCTGGAGAGAAATCTTCACATCTTGTGATATCTTGGGGTATGAACTTCCTACAAAGCACAATGATGAAAGGAATGATAGAAGGGGGCACTAAGCAAGGATTGAAGGAGAGTTTTGACCAAGTTGCTAATGTACTTGGCCAAAGTTTTAAGGTGCTAGATTCCACAGATGTAATAGACAAAGAACACTTGCTGGCAAATTTGCAAGCAGAAGATCAGTGGAATTGGTGGCTGGCAATCAAATACTTTTCGAATTTCACAGTAGTTTCCACCTTTTTTATGTTTCTGTATGTGTTGCTTCATATATCGCGGTGCAGACCAAATGAATCTCAGGGCTTGGAATTCAAGGGGCTTGAATTGCCAGATAGCTTTGGAGAGCTTGTTACAAGTGCAATCTTAATCTTCCAATTGCAGCGAGTTTTCAATATGATTTCTCACTTTGTGCAAGCTAGATTTCAAATGGGAACTGACCATGGCCTAAAGGCGAATGGCGATGGATGGGTTGTGACGGTGGCTTTAATTGAGGCGGTCGACTTGGCATCGTTGGAGACGACAGGGAAGTCAGACCCTTATGTAGTTTTCACCTGCAATGGACAAACAAGGTCAAGCTCGGTGAAGCTTCAAACGTCGGATCCTCAGTGGAATGAGATATTAGAGTTTGGTGCTACGGAAGAACCACCATCAGTCTTAGATGTTGAGGTTTTTGATTTCGATGGTCCATTTGATCAAGATATTTCACTTGGTCGTGCTGAGATCAATTTCTTAAAACACACGCCAACAGAATTGGCAGACATGTGGGTCTTGCTTGAAGGAAAACTCGCTAAGTCTGCGCAATCGAAGTTGCATTTAAGGATTTTCTTGGACAATAATAAAGGAGTTGAAACAATCAAGGAATATTTGGAGAAGATGGAAAAGGAAGTAGGCAAAAAGTTGAATCCTCGATCACCTCAACAGAATTCTACCTTCCAGAAATTGTTCGGGTTACCGCCGGAGGAATTTCTGATCAAAGATTTCACATGTTACTTAAAGAGAAAAATGCCCTTACAGGGGAGGATGTTCCTTTCGGCTAGGATTCTGGGGTTTTATGCCAATTTGTTTGGACATAAAACCAAATTTTTCTTCCTTTGGGAAGATATTGAAGACATACAAGTGCTTCCTCCAACATTGGCATCAGTAGGAAGCCCTATATTGGTCATAATTCTGCGACGGGGTCGGGGACTAGACGCAAGGCACGGTGCCAAGACTCAAGATGAGGAAGGAAGACTTAGGTTCCATTTTCAGTCATTTGTTTCATTTAGTGCTGCTTCCAGAACAATTCGTGCCTTGTGGAGGGCGCGGACACTGAACTTGTACCAGAGAGAGCAACTTTCCGAAGATCATGAAGATCAAGAAGGCTTTGTAATTCCTGAGGACTCTGAATATATGCTGGAAAATGAAGGGAAAATGTCCAAAATTTATTCTGCAGAACTTCCAATTAAGATGAGATCCATGATGGGAATCTTTGATGGAGGAAACTTGGAGCACAAGATTATGCAGAGAACAGGATGTATGAACTATGAAACTACTGCATGGGAACAAGTAAAGCCTGACGTCTTCGAAAGGCGCGTTTCGTACAAATTCAACCGGCAGGTGTCAGTTTTTGGTGGTGAAGTCACATGCACACAACAAAAGCTTCCAAATCTAAACACTGGAGGTTGGATTGTGAATGAGGTTATGGCTCTTCATGGTGTCCCATTTGCTGATCACTTCCGTATTCATTTTAGGTATGAAATTGAGAAATCTGCTCTTGGTGAATGTGCTTGCAAGTGTGATACATACATTGGGATTTCATGGCTAAAGAGCTCAAAGTTTGAACAGAGGATCAACAGGAACATAACAGCCAAGTTTACAATTCGAGTGAAGGAAATATTTGAATTGGTTCAGAAAGAGATCTTGTTGATGTCTCAGAACTCAAATGGGTAA 3036 0.4097 MKTMNKLIGAKDLPVKESYVKLKLGRFKSKTRILRNTCDPVWNEEFAFRVHDLEQVLVVSVVNHHHSDELRIINGGSVDIVGEVRVLVGSVASVDKQTLPPTWFSLVSPKTGKFFNKYCGKILLTISLHSKGHSNHTNSNNSTFAIEDSRDLEGVSSQSLSSKMGESKQLLKVITSRLDRIFNKKEGSSKSEDSSEQSNFFSDSEDCVHEDSSSTCNFEEAIAQMEAGDSKPEMPENLQGGVLLDQIFVVSPYDLNAFLFAPNSQFRKDLAELQGTTNVQEGPWMWKPGDTPRLSRVVSYTKAASKLVKAINASEEQTYVRVAKDEFAVLVSVSTPEVPYGNTFRVELLYKIMPGGELCSGEKSSHLVISWGMNFLQSTMMKGMIEGGTKQGLKESFDQVANVLGQSFKVLDSTDVIDKEHLLANLQAEDQWNWWLAIKYFSNFTVVSTFFMFLYVLLHISRCRPNESQGLEFKGLELPDSFGELVTSAILIFQLQRVFNMISHFVQARFQMGTDHGLKANGDGWVVTVALIEAVDLASLETTGKSDPYVVFTCNGQTRSSSVKLQTSDPQWNEILEFGATEEPPSVLDVEVFDFDGPFDQDISLGRAEINFLKHTPTELADMWVLLEGKLAKSAQSKLHLRIFLDNNKGVETIKEYLEKMEKEVGKKLNPRSPQQNSTFQKLFGLPPEEFLIKDFTCYLKRKMPLQGRMFLSARILGFYANLFGHKTKFFFLWEDIEDIQVLPPTLASVGSPILVIILRRGRGLDARHGAKTQDEEGRLRFHFQSFVSFSAASRTIRALWRARTLNLYQREQLSEDHEDQEGFVIPEDSEYMLENEGKMSKIYSAELPIKMRSMMGIFDGGNLEHKIMQRTGCMNYETTAWEQVKPDVFERRVSYKFNRQVSVFGGEVTCTQQKLPNLNTGGWIVNEVMALHGVPFADHFRIHFRYEIEKSALGECACKCDTYIGISWLKSSKFEQRINRNITAKFTIRVKEIFELVQKEILLMSQNSNG* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1562 1011 Pfam VAD1 Analog of StAR-related lipid transfer domain 843 983 IPR031968 -
Aev04g1562 1011 Pfam VAD1 Analog of StAR-related lipid transfer domain 243 392 IPR031968 -
Aev04g1562 1011 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 525 649 IPR035892 -
Aev04g1562 1011 PANTHER C2 AND GRAM DOMAIN-CONTAINING PROTEIN 3 1008 - -
Aev04g1562 1011 MobiDBLite consensus disorder prediction 185 206 - -
Aev04g1562 1011 Gene3D C2 domain 6 158 IPR035892 -
Aev04g1562 1011 Pfam GRAM domain 679 775 IPR004182 -
Aev04g1562 1011 CDD C2 6 106 - -
Aev04g1562 1011 SMART C2_3c 2 100 IPR000008 -
Aev04g1562 1011 SMART C2_3c 526 625 IPR000008 -
Aev04g1562 1011 ProSiteProfiles C2 domain profile. 506 625 IPR000008 -
Aev04g1562 1011 Gene3D - 676 803 IPR011993 -
Aev04g1562 1011 ProSiteProfiles VASt domain profile. 239 412 IPR031968 -
Aev04g1562 1011 SMART gram2001c 678 744 IPR004182 -
Aev04g1562 1011 PANTHER BNAA05G37250D PROTEIN 3 1008 IPR044511 -
Aev04g1562 1011 Pfam C2 domain 7 106 IPR000008 -
Aev04g1562 1011 Pfam C2 domain 526 625 IPR000008 -
Aev04g1562 1011 CDD C2 527 627 - -
Aev04g1562 1011 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 132 IPR035892 -
Aev04g1562 1011 Gene3D C2 domain 509 645 IPR035892 -
Aev04g1562 1011 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Aev04g1562 1011 ProSiteProfiles VASt domain profile. 839 1002 IPR031968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1562 Aev-Chr4 11242931 11250804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1562 525 651 Lipid Metabolism Gene Families AT5G12970 32.624 1.34e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1562 - - gmx:100811103 1558.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1562 04 11242931 11250804 Aev04g1562 04 11242931 11250804 ECH