Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1561 ATGGATCCGAACCCACGAAACTTCCCAATCCTCTCTTACGTCATGTCCCGTCTCCCTTCCTTAACCTCCCGAACAACAGCCGCCGCCGCCACTTCCGACAACTTCGACATCGAACAGCCCCAACCCTCTCATCCTTCCTCTTCCTCTTCGGGCCCACTCCGCCCCGAAATCGTGGGCCAAATGCCTCACCTCGAGGACCCAAACCTCCTTGCCTCTATGGGCCGGGCCATCTCCGATGTCGCCCAGGCCCGATCCGTCCTCAACTTGATCGGCGAGCGGCCCACCCATGAGGAAGTCGACACCGCGCGTGCCGAGCTGGCCGACCTCGAGGCCCGGCTCTCCCGTCAGCTGGAGGAGATCGTGCTTGAGCCCAGGCCCGATGACGTGGACATCCACTCGTGGCGGGCCCAGCAGGCCGAGAGGGAGCACCGGTGCAGGGAGGAAGCGGATAAGGAGAGGCGCATCGTGAAGTCCGTGATACAGCTCGACGAGATGCACGAGGCGTACGAGAAGCTCCTCAGCGACGCGGAGAAGAGGCTCGTGAAGATTTATGAGGAAGGTGCTGATGGCGGCGATGAGAACAATGGCGGTGGTGGTGATGAGGTGAATGAAGAGGTTGCGGGGATTCTGCAGGAAGCTTATGGAAGAGGGATGGAGAGAGTGGATCTCTCCGGGAGGAGGTTGCGGTTGCTGCCGGAGGCCTTTGGCAGGATTTCCGGCCTGGTGGTGCTCGATGTTTCCGGCAACCAGCTTACGACAATTCCTGACTCAATAGCTGGATTGCAAAATCTGGAAGACCTTAATCTCTCTTCAAATATTTTGGAGTCACTTCCGGATTCAATTGGGTTGTTACAAAAATTGAAATTCCTCAATGTCAATGGAAACAAGCTGAGTGCCCTTCCTGATCCCATCTGTCAGTGCAGGTCATTGGTGGAGCTGGATGTTAGCTTTAACAATCTGTCATATTTGCCAACAAACATTGGATATGAACTGCCAAACTTAAATAAACTCATGATTCAACTGAACAAGATTCGATCTCTTCCCTCATCCATCTGCGAGTTGAAGTCGCTGCGGTATCTGGATGCTCACTTCAACGAGCTACATGGACTTCCTATGGCAATTGGGAGACTCACTAATCTTGAAGTTCTCAACCTGAGCAGCAACTTCAGTGACCTCAAAGAACTTCCTGAAACATTTGGCGATTTGACTAACCTCAAGGAACTGGATCTCAGCAATAACCAGATTCACGCACTTCCGGATACATTCGGCCGCCTTGATAATCTGACCAAGCTAAACTTGGATCAGAATCCTCTTGAATTGCCACCAATGGAGATTGTAAATCAAGGGGTCGAAGCCGTAAAGGCGTTTATGGCCAAGAGGTGGATTGACATATTGTTAGAGGAGGAAAGGAGAAGCAATCAAGAAATGCAAGAACAAGGACAGGGTGGCTGGTTAACAAGAAGCACCTCATGGTTGAAGAGTGTGTCAGGAAATGTGATCGGTTATCTTGGAACCGTTGGATCTCCTGCGGCACCGAAATCTCCCAGAGATGCTTTTCTTGATCAGGAGCTATGA 1575 0.5213 MDPNPRNFPILSYVMSRLPSLTSRTTAAAATSDNFDIEQPQPSHPSSSSSGPLRPEIVGQMPHLEDPNLLASMGRAISDVAQARSVLNLIGERPTHEEVDTARAELADLEARLSRQLEEIVLEPRPDDVDIHSWRAQQAEREHRCREEADKERRIVKSVIQLDEMHEAYEKLLSDAEKRLVKIYEEGADGGDENNGGGGDEVNEEVAGILQEAYGRGMERVDLSGRRLRLLPEAFGRISGLVVLDVSGNQLTTIPDSIAGLQNLEDLNLSSNILESLPDSIGLLQKLKFLNVNGNKLSALPDPICQCRSLVELDVSFNNLSYLPTNIGYELPNLNKLMIQLNKIRSLPSSICELKSLRYLDAHFNELHGLPMAIGRLTNLEVLNLSSNFSDLKELPETFGDLTNLKELDLSNNQIHALPDTFGRLDNLTKLNLDQNPLELPPMEIVNQGVEAVKAFMAKRWIDILLEEERRSNQEMQEQGQGGWLTRSTSWLKSVSGNVIGYLGTVGSPAAPKSPRDAFLDQEL* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1561 524 SUPERFAMILY L domain-like 218 443 - -
Aev04g1561 524 SMART LRR_bac_2 284 303 - -
Aev04g1561 524 SMART LRR_bac_2 261 280 - -
Aev04g1561 524 SMART LRR_bac_2 331 350 - -
Aev04g1561 524 SMART LRR_bac_2 238 257 - -
Aev04g1561 524 SMART LRR_bac_2 377 398 - -
Aev04g1561 524 SMART LRR_bac_2 402 421 - -
Aev04g1561 524 SMART LRR_bac_2 354 373 - -
Aev04g1561 524 SMART LRR_bac_2 307 326 - -
Aev04g1561 524 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 3 508 - -
Aev04g1561 524 ProSiteProfiles Leucine-rich repeat profile. 263 284 IPR001611 GO:0005515
Aev04g1561 524 Gene3D Ribonuclease Inhibitor 114 333 IPR032675 -
Aev04g1561 524 Pfam Leucine rich repeat 240 297 IPR001611 GO:0005515
Aev04g1561 524 Pfam Leucine rich repeat 308 367 IPR001611 GO:0005515
Aev04g1561 524 Pfam Leucine rich repeat 379 438 IPR001611 GO:0005515
Aev04g1561 524 PRINTS Leucine-rich repeat signature 402 415 - -
Aev04g1561 524 PRINTS Leucine-rich repeat signature 241 254 - -
Aev04g1561 524 ProSiteProfiles Leucine-rich repeat profile. 404 425 IPR001611 GO:0005515
Aev04g1561 524 MobiDBLite consensus disorder prediction 33 60 - -
Aev04g1561 524 Coils Coil 99 119 - -
Aev04g1561 524 Coils Coil 159 186 - -
Aev04g1561 524 SMART LRR_typ_2 261 283 IPR003591 -
Aev04g1561 524 SMART LRR_typ_2 284 307 IPR003591 -
Aev04g1561 524 SMART LRR_typ_2 308 330 IPR003591 -
Aev04g1561 524 SMART LRR_typ_2 377 401 IPR003591 -
Aev04g1561 524 SMART LRR_typ_2 402 424 IPR003591 -
Aev04g1561 524 SMART LRR_typ_2 331 354 IPR003591 -
Aev04g1561 524 SMART LRR_typ_2 238 260 IPR003591 -
Aev04g1561 524 SMART LRR_typ_2 425 448 IPR003591 -
Aev04g1561 524 PANTHER LEUCINE-RICH REPEAT-CONTAINING 3 508 - -
Aev04g1561 524 Gene3D Ribonuclease Inhibitor 334 458 IPR032675 -
Aev04g1561 524 MobiDBLite consensus disorder prediction 33 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1561 Aev-Chr4 11237740 11241027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1561 217 447 Receptor kinase-like Gene Family AT5G46330 37.759 7.71e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1561 - - gmx:100803823 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1561 04 11237740 11241027 Aev04g1561 04 11237740 11241027 ECH