Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1552 ATGCTCATGTCACCCATGCCTTCCCTTAACAAAGTGTTCGGCATGATCATTCAACAAGAGAGACAACTCTCCATTGAGGGCATCGACAACAATAAGGCGTTGATTAATCATGTTGTCACTAATAATAGGGATTTTGCAGGCAATAAGTCTTTTGTAAATGGTCAATCCAAGCAAGGGAATCAACAAGGTCCAAAGAAAAGATGCATTCACTGTGGAAGAAATGGCCACACTATTGACAATTGCTTCAAAATACATGGATATCCCCCGGGGTACAAGTCAAGAAATTTAAACTTCAAGGGTGCAAATCTTGTTGTTTCTAATGATCCTGGCCAAGAAATTTCTGATTCAGGCCCAAAGTTCAGCCTCACTGCTGAGCAATATCAAAGTCTGCTTGCACTGCTACCTTCCACAAATAATTCTCAAGCAAATGCAAACTTTGCAGCAGTCAATAACTCTTCTTCATTACCCTTGAATAATGGGAAGCAAAGTGATGATCAACATCATCATCATCATCATGGAGCAGTGAGCAGATCAGGCCAGAGTGTTCACATGTCAGTGTACAGAACAAAAGTTGCTGATCACTGCCGCTTGATCACAGTGACATGGTGCAAGAACTTGCTCCTCCATGGCCTATCAGTATCAGTAGAAGGCCCTGAAGGAGGAGAATCTCACTACACTTGCAAGGTTGAACTGAAGCCATGGTACTTTTGGAGGAAACAAGGGTCAAAGAGGTTCATAGTTGATGGTAAAGCTGTTGACATATTCTGGGACCTCAAAGCTGCAAAATTCAATAATGGTGAAACAGAACCAACCTCAGAGTACTATGTAGCAGTAGTTTGTGACAGAGAGGTTGTGCTTCTTCTTGGTGATCTTAAGAAAGATGCTTATAGGAGAACTGGTGGCAGACCAGCTCTTATTGATCCAATTTTGGTGTCAAAAAAAGAGCACATATTTGGGAAGAAGAAGTTTTCTACTAGAGCTAAGTTTCATGAGAAGGGTAGGAGCCATGAGATCTCAATAGAGTGCAAAAACAGAGGAAATAGTAGTAATGGGGAGTCATCAGAAAATGGGGTTCATCATCATCATCAGCCAGAGATGGAGATAAGATTTGATGGGCACCTTGTGATCCATGTGAAGCAATTGCAGTGGAAATTCAGAGGCAATGAATCAGTGAATCTGAACAAGATGAGAGTTGAGGTGTATTGGGATGTTCATGATTGGCTATTCAGTGCTGGTTTGAAGCATGCCCTGTTCATTTTTAAGCCTATTTTGCTGTCATCAACATCTGCATATTATTCATCTATGTCATCATCACTCTCCTCATCATGTTCACCACCATTGTCTTCTTCATCTACACCTTTGTCAACTCATACTGCTGGGAGTTCAGGGTCTGTTGTAGAGGGCTTAAGTAGTGTCACTGGTTCATCAGATTTTTCCTTGTTCATCTATGCTTGGAAGGCTGAATAA 1467 0.4145 MLMSPMPSLNKVFGMIIQQERQLSIEGIDNNKALINHVVTNNRDFAGNKSFVNGQSKQGNQQGPKKRCIHCGRNGHTIDNCFKIHGYPPGYKSRNLNFKGANLVVSNDPGQEISDSGPKFSLTAEQYQSLLALLPSTNNSQANANFAAVNNSSSLPLNNGKQSDDQHHHHHHGAVSRSGQSVHMSVYRTKVADHCRLITVTWCKNLLLHGLSVSVEGPEGGESHYTCKVELKPWYFWRKQGSKRFIVDGKAVDIFWDLKAAKFNNGETEPTSEYYVAVVCDREVVLLLGDLKKDAYRRTGGRPALIDPILVSKKEHIFGKKKFSTRAKFHEKGRSHEISIECKNRGNSSNGESSENGVHHHHQPEMEIRFDGHLVIHVKQLQWKFRGNESVNLNKMRVEVYWDVHDWLFSAGLKHALFIFKPILLSSTSAYYSSMSSSLSSSCSPPLSSSSTPLSTHTAGSSGSVVEGLSSVTGSSDFSLFIYAWKAE* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1552 488 ProSiteProfiles Zinc finger CCHC-type profile. 67 81 IPR001878 GO:0003676|GO:0008270
Aev04g1552 488 MobiDBLite consensus disorder prediction 342 361 - -
Aev04g1552 488 Pfam Plant protein of unknown function (DUF868) 178 486 IPR008586 -
Aev04g1552 488 PANTHER OS01G0909400 PROTEIN 162 488 - -
Aev04g1552 488 MobiDBLite consensus disorder prediction 150 181 - -
Aev04g1552 488 PANTHER EXPRESSED PROTEIN 162 488 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1552 Aev-Chr4 11162216 11170898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1552 159 488 EF-hand Containing Proteins AT5G28150 35.736 6.77e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1552 - - gmx:100779755 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1552 04 11162216 11170898 Aev04g1552 04 11162216 11170898 ECH