Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1530 ATGGGTGGATCAATTTCAAAAAGGGGTAGGTCTAGGCGTTCAATTTCAACTTCAAGGTCAAGTTCAAGTTCATGGTATCCTCAGTATCAAGCACCTTCTTATGCACAAAGCCAACATGATGAGCCACAGGGTGGTGGCTATTATCCTGGCCATGCATCTGAAAGCTATGTTGGTGGTGGCGGTGGTGGGTATGCCACAGAGCAGAAAAAGAGGTTGGAGAGGAAGTTTTCAAGGATAGATGATAATTATAGTAACTTGGATCAGGTAACTGAGGCTCTAGCAGGTGCTGGCCTAGAGTCTTCCAATCTGATTGTTGGTATTGATTTTACAAAGAGCAATGAGTGGACAGGTGGAAGGTCATTTCAAAGGAGATGCTTGCATCACATCGGTCACGAGCAAAATCCATATGAACAAGCTATATCTATCATTGGGAAAACATTGTCTTCCTTTGATGAGGATAACTTAATTCCCTGTTTTGGATTTGGAGATGCATCAACGCATGACCAGGAAGTTTTTAGTTTCTACCCTGATGATAGATTTTGCCGTGGGTTTGAAGAAGTGTTAACTCGATACAGGGAATTGGTCCCTCAATTAAAGCTTGCAGGACCAACATCGTTTGCCCCAATCATTGAGATGGCAATCAGCATAGTTGAGCAGAGTGGAGGCCAGTACCATGTCTTATTGATCATAGCTGATGGACAGGTGACAAGAAGTGTTGATACCGAGCGTGGGCAACTGAGTGCACAAGAAAGGAAAACTGTGGAAGCTATTGTAAAAGCTAGTGAATATCCCCTGTCAATCATTCTGGTTGGAGTTGGAGACGGGCCGTGGGACATGATGAGAGAATTTGATGATAACATCCCTGCTCGAGCATTTGATAATTTCCAGTTTGTGAATTTCACAGAAATAATGTCAAAGAACATTGATCGATCCCGAAAGGAAGCAGAGTTCGCACTTGCTGCCTTGATGGAAATACCATCCCAGTACAAGGCAACACTAGAACTTAACATATTAGGTTCTCGCAGAGGAAAAGATATAGACAGGATCGCTCTACCACCACCTCTCTATGGTGCTGGTGCTGGTGCCCCATCTTATGACTCCCCAAAACCTTCCCGTCAAAGCAGTTTCCGTCCCAGTGCACCATCTCACAGGCACGACATTGCCCCGGATCCGGAACCTCCTACAAGTTATCCTCCTGCAAGTTCTGCTTCGGATAACCAGGTTTGTCCCATTTGCCTCACTAATCCCAAGGATATGGCCTTCGGTTGCGGGCATCAGACATGTTGTGAGTGTGGACCAGGTCTTGAATTATGCCCCATATGCAGGAGTATTATTGAAACCAGAATAAAACTTTACTAA 1359 0.4474 MGGSISKRGRSRRSISTSRSSSSSWYPQYQAPSYAQSQHDEPQGGGYYPGHASESYVGGGGGGYATEQKKRLERKFSRIDDNYSNLDQVTEALAGAGLESSNLIVGIDFTKSNEWTGGRSFQRRCLHHIGHEQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDDRFCRGFEEVLTRYRELVPQLKLAGPTSFAPIIEMAISIVEQSGGQYHVLLIIADGQVTRSVDTERGQLSAQERKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMSKNIDRSRKEAEFALAALMEIPSQYKATLELNILGSRRGKDIDRIALPPPLYGAGAGAPSYDSPKPSRQSSFRPSAPSHRHDIAPDPEPPTSYPPASSASDNQVCPICLTNPKDMAFGCGHQTCCECGPGLELCPICRSIIETRIKLY* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1530 452 Pfam Copine 125 339 IPR010734 -
Aev04g1530 452 ProSiteProfiles Zinc finger RING-type profile. 409 442 IPR001841 -
Aev04g1530 452 PANTHER COPINE FAMILY PROTEIN 1 1 452 - -
Aev04g1530 452 SUPERFAMILY RING/U-box 404 448 - -
Aev04g1530 452 SUPERFAMILY vWA-like 101 284 IPR036465 -
Aev04g1530 452 MobiDBLite consensus disorder prediction 360 401 - -
Aev04g1530 452 CDD RING-HC_RGLG_plant 408 452 IPR045317 GO:0061630|GO:0070534
Aev04g1530 452 SMART VWA_4 100 303 IPR002035 -
Aev04g1530 452 Pfam Zinc finger, C3HC4 type (RING finger) 406 447 - -
Aev04g1530 452 MobiDBLite consensus disorder prediction 1 53 - -
Aev04g1530 452 CDD vWA_copine_like 79 329 IPR010734 -
Aev04g1530 452 MobiDBLite consensus disorder prediction 9 40 - -
Aev04g1530 452 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 397 452 IPR013083 -
Aev04g1530 452 PANTHER RING-FINGER PROTEIN 1 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1530 Aev-Chr4 11018591 11021742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1530 K16280 - gmx:100809850 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1530 04 11018591 11021742 Aev04g1530 04 11018591 11021742 ECH