Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1512 ATGGCGGAGCCAATGGAACCAAAGCTTCAAATTGCTGCTGCAGCAGCAGCAGAAGCTTCCAAGTCCAAGAGTCTGAACCCTACGAAACTCGTCGTTTTAGCTGACCTCAACGTCGATCCCCCTGACGACGACGACACCACCACCACCACCAACGATTCTTCCCACCTCCCTCCTCCTCCTCCTCCACCACCGCCTCCACCTATCACCAGATTGGCAAGTGATGAAAGCAGTCAAGATAAGAGTTTGTTGTCCAAAGACAGTGATAGCATTGAAGGTGAAGGTAAAAAATTGAGCAAATTGGGGAAATGCCGATCCAGACTTAACAAGACAGATTCTTCTCTTGAATGTGGAGCTGATGCAGATGGTGATCAACATGTTCAAGGAACTCCTTCCTCTCGTGAGGAAAAAGTTAGCAGTATGAAAACTGGCTTGGTTCATGTTGCAAGGAAGATGCCCAAAAATGCTCATGCTCATTTTATTCTTGGCTTGATGTACCAAAGATTAAACCAACCTCAAAAGGCTATATTAGCTTATGAAAAGGCAGCTGAGATCCTACTCAAGCCTGAGACTGAGGTTGAAAGGCCAGAGTTGCTTTCATTAGTTCAGATTCACCATGCACAGTGCCTGATACTAGAAAGTTCATCAGAAAATAGTTCAGATAAAGAACTTGAACCTCACGAACTTGAGGAAATTCTTTCCAAACTGAAAGAGTCAGTGCAATCAGATATCAAACAGGCAGCCGTATGGAATACACTAGGTTTTATCCTCCTTAAAAGTGGTCGCGTCCAGAGTGCTATTGCAGTTTTGTCATCATTGTTGGCCACTTCACCAGAGAACTATGATTGCCTAGGAAATCTTGGGATAGCTTATCTTCAAACTGGGAATTTGGAATTATCTGCAAAATGTTTCCAAGAGTTGATCCTGAAAGATCAAAACCATCCTGCAGCTTTAGTCAACTATGCTACCCTTCTTTTGTGTAAACATGCTTCAGTTGTGGCAGGTGTTGGTGCAAGTGCTGCTGAAGGTGCTTTGGCAGATCAGGCTATGTCTGTTAATGTCGCTAAGGAATGTTTGTTAGCTGCTATTAAAGTGGATGGCAAATCAGCCCATATCTGGGCAAATCTTGCCAATGCATTTTCTATGAGTGGTGATCATCGAAGTTCCAGCAAGTGCTTGGAGAAGGCAGCAAAACTGGAACCCAATTGCATGTCTACTCGATATGCTGTTGCTATTCATCGAGTGAAGGAGGCAGAAAGATCTCAAGATCCCAGTGAACTGCATTCATGTGCTGGAAACGAGATGGCTTCTATAATAAGGGATGGCGATTCATCACTGGTTGAGCTTCCAATAGCATGGGCCGGGCTTGCTTTGGTTCACAAGTCTCAGAATGAGATAGCAGCAGGATATGAAAATGAACAGCATGAGTTGACGGAAGTTGAAGAGCGCACTGTTAGCAGTTTAAAACAGGCTATAGCAGAAGATCCAGATGATGCTGTGCAGTGGCTGCAACTTGGCCTTCATAGTCTTTGTGCTCGGCAATTCAAAACATCACAAAAGTACCTCAAAGCTGCTATTGCCTGCGACAAGGATTCCAGCTATGCGTGGTCTAACCTCGGTGTATCACTTCAACTATCAGATGATCCATCACAAGCTGAAGAAGTATTCAAAAAGGCTTTATCTTTGGCAACTACTCAACAAGCACATGCCATATTATCTAACTTGGGGATCCTCTACCGTTACCAGAAACAATACGAGCGCGCCAAGGCAATGCTCACAAAGTCACTTGAACTTCAGCCAGGCTATGCTCCTGCATTCAACAATCTTGGTCTTGTTTTTGTTGCTGAGGGTCTTTTGGAAGAGGCCAAGTATTGTTTTGAAAAAGCCCTCCAATCTGATCCCTTGCTTGATGCAGCCAAATCCAACTTGATTAAGGTTGTTTCCATGACAAAGTTATGTAGAGACCTATCTTCATGCCATGTTAAAGAATAA 1989 0.4394 MAEPMEPKLQIAAAAAAEASKSKSLNPTKLVVLADLNVDPPDDDDTTTTTNDSSHLPPPPPPPPPPPITRLASDESSQDKSLLSKDSDSIEGEGKKLSKLGKCRSRLNKTDSSLECGADADGDQHVQGTPSSREEKVSSMKTGLVHVARKMPKNAHAHFILGLMYQRLNQPQKAILAYEKAAEILLKPETEVERPELLSLVQIHHAQCLILESSSENSSDKELEPHELEEILSKLKESVQSDIKQAAVWNTLGFILLKSGRVQSAIAVLSSLLATSPENYDCLGNLGIAYLQTGNLELSAKCFQELILKDQNHPAALVNYATLLLCKHASVVAGVGASAAEGALADQAMSVNVAKECLLAAIKVDGKSAHIWANLANAFSMSGDHRSSSKCLEKAAKLEPNCMSTRYAVAIHRVKEAERSQDPSELHSCAGNEMASIIRDGDSSLVELPIAWAGLALVHKSQNEIAAGYENEQHELTEVEERTVSSLKQAIAEDPDDAVQWLQLGLHSLCARQFKTSQKYLKAAIACDKDSSYAWSNLGVSLQLSDDPSQAEEVFKKALSLATTQQAHAILSNLGILYRYQKQYERAKAMLTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFEKALQSDPLLDAAKSNLIKVVSMTKLCRDLSSCHVKE* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1512 662 ProSiteProfiles TPR repeat profile. 369 402 IPR019734 GO:0005515
Aev04g1512 662 ProSiteProfiles TPR repeat profile. 602 635 IPR019734 GO:0005515
Aev04g1512 662 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 16 660 - -
Aev04g1512 662 Pfam Tetratricopeptide repeat 534 597 - -
Aev04g1512 662 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN 16 660 - -
Aev04g1512 662 SMART tpr_5 498 531 IPR019734 GO:0005515
Aev04g1512 662 SMART tpr_5 602 635 IPR019734 GO:0005515
Aev04g1512 662 SMART tpr_5 369 402 IPR019734 GO:0005515
Aev04g1512 662 SMART tpr_5 568 601 IPR019734 GO:0005515
Aev04g1512 662 SMART tpr_5 532 565 IPR019734 GO:0005515
Aev04g1512 662 SMART tpr_5 280 313 IPR019734 GO:0005515
Aev04g1512 662 SMART tpr_5 246 279 IPR019734 GO:0005515
Aev04g1512 662 SMART tpr_5 155 188 IPR019734 GO:0005515
Aev04g1512 662 MobiDBLite consensus disorder prediction 34 96 - -
Aev04g1512 662 SUPERFAMILY Formin homology 2 domain (FH2 domain) 57 184 - -
Aev04g1512 662 ProSiteProfiles TPR repeat profile. 246 279 IPR019734 GO:0005515
Aev04g1512 662 SUPERFAMILY TPR-like 340 561 IPR011990 GO:0005515
Aev04g1512 662 Gene3D Tetratricopeptide repeat domain 212 333 IPR011990 GO:0005515
Aev04g1512 662 MobiDBLite consensus disorder prediction 54 70 - -
Aev04g1512 662 Gene3D Tetratricopeptide repeat domain 342 437 IPR011990 GO:0005515
Aev04g1512 662 Gene3D Tetratricopeptide repeat domain 567 653 IPR011990 GO:0005515
Aev04g1512 662 ProSiteProfiles TPR repeat profile. 532 565 IPR019734 GO:0005515
Aev04g1512 662 MobiDBLite consensus disorder prediction 111 138 - -
Aev04g1512 662 Pfam Tetratricopeptide repeat 256 315 - -
Aev04g1512 662 Gene3D Tetratricopeptide repeat domain 142 205 IPR011990 GO:0005515
Aev04g1512 662 Pfam Tetratricopeptide repeat 369 402 IPR019734 GO:0005515
Aev04g1512 662 Pfam Tetratricopeptide repeat 155 184 IPR019734 GO:0005515
Aev04g1512 662 Pfam Tetratricopeptide repeat 602 633 IPR019734 GO:0005515
Aev04g1512 662 ProSiteProfiles TPR repeat profile. 568 601 IPR019734 GO:0005515
Aev04g1512 662 MobiDBLite consensus disorder prediction 79 96 - -
Aev04g1512 662 Gene3D Tetratricopeptide repeat domain 481 566 IPR011990 GO:0005515
Aev04g1512 662 SUPERFAMILY TPR-like 245 633 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1512 Aev-Chr4 10890330 10895253 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1512 - - adu:107478871 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1512 04 10890330 10895253 Aev04g1512 04 10890330 10895253 ECH