Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1502 ATGGTTTCTATGGTTTTGGAAGTTCTAAGGAGGAAATTTGGGTTGAGTGAGGATGTTGAAATATCGATGGAAATGGACCCGGGGACTTTTGATGCTGAGAAGATGAAGGAGATGATGATGTTGGGAGTGAATAGGGTGTCTTTGGGAGTTCAAGCATTTCAGGAGAAGCTTCTGAAGGCTTGTGGGAGGGCACATGGTTTGAGAGAGGTTCATGAGGCCATTGATATTGTGAAGCTGTGTGGGGTTGAGAATTGGAGTATTGATCTTATTGCTTCACTTCCTCATCAGACAAGTGATATGTGGGAGGAGAGCCTGAGGCTCACCATTGAGGCTCAACCAACTCATGTTTCTGTTTATGATTTGCAAATTGAGCAGGGGACAAAATTTGGAGCCTTGTATACACCAGGGGAATTTCCTCTGCCTTCTGAGAAACAATCAGCAGATTTCTATAAGATGGCTTCAAGAATGCTTTCAGATGCCAATTATAACCATTACGAAATCAGCAGCTACTGCAAGAGTGGATATGAGTGCAAGCACAACTTTACCTATTGGAAGAACAAGCCTTTCTACGGCTTCGGCCTTGGCTCTGCTAGTTTTGTTGGCGGACTGAGGTATTCGAGGCCAAAGAAAGTGAACGATTACACGAAGTTTGTCGAAAATTTGGAAAATGGATTAGTGAATAGCTCTGGTGAGGGCCATATTCATGGCAAGGACACTGCCATGGATGTGGTGATGCTGTCCCTAAGAACTGCAAGAGGGATAGACTTGAAGTGTTTCCAAGAATCATTTGGAAGCTCTATTGTTTTATCACTTCTTGAGGTTTATAAGCCTTATTTTGAGAGTGGACATGTGGTTTGTTTGGACAAGAAGAGGAGAACAATCAGAACAAATGACCTCAAAAATTGTCTAATGGATGAAACTAACACAGAAGAAGGGATGGCCTATATAAGGCTAAGTGATCCAGAAGGTTTCCTCTTATCAAATGAGCTGATATCCCTTGCTTTTGGGGTTATTGACTCTTACAAAGATTGCTCTCCCAACATGGAGATTATTTGA 1056 0.4233 MVSMVLEVLRRKFGLSEDVEISMEMDPGTFDAEKMKEMMMLGVNRVSLGVQAFQEKLLKACGRAHGLREVHEAIDIVKLCGVENWSIDLIASLPHQTSDMWEESLRLTIEAQPTHVSVYDLQIEQGTKFGALYTPGEFPLPSEKQSADFYKMASRMLSDANYNHYEISSYCKSGYECKHNFTYWKNKPFYGFGLGSASFVGGLRYSRPKKVNDYTKFVENLENGLVNSSGEGHIHGKDTAMDVVMLSLRTARGIDLKCFQESFGSSIVLSLLEVYKPYFESGHVVCLDKKRRTIRTNDLKNCLMDETNTEEGMAYIRLSDPEGFLLSNELISLAFGVIDSYKDCSPNMEII* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1502 351 PANTHER COPROPORPHYRINIGEN III OXIDASE 2 337 IPR034505 -
Aev04g1502 351 SMART MiaB 1 152 IPR006638 GO:0003824|GO:0051536
Aev04g1502 351 PANTHER RADICAL S-ADENOSYL METHIONINE DOMAIN-CONTAINING PROTEIN 1, MITOCHONDRIAL 2 337 - -
Aev04g1502 351 TIGRFAM hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 4 283 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Aev04g1502 351 Pfam Radical SAM superfamily 13 107 IPR007197 GO:0003824|GO:0051536
Aev04g1502 351 Gene3D tm_1862 like domain 3 160 IPR023404 -
Aev04g1502 351 SUPERFAMILY Radical SAM enzymes 5 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1502 Aev-Chr4 10788252 10789900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1502 - K07739 gmx:100779022 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1502 04 10788252 10789900 Aev04g1502 04 10788252 10789900 ECH