Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1436 ATGAAATCAACCAAGATTCATCTCCAACATATTCTTGATCATGTTTCTTACTCCATGGGAACCAAGAAAGCAGAACCAACCTCTCTTAAGGTCACTTGTGCGGGGCAGATCAAGGTTAGGCTTAAGACCGTAGCTTGCAGGAGCTGGCAATCAGTGATGGAAGAGATAGGAAGCGTTTTCAACTGGGCTGAATCAATTGGTTTCAAGAAGGAGATAATGCACTTCTTGACTGTGTTTGCGAAGCATAAGAACTCTGAGGAAGAGGTTAGGGTTGCGCTTGACCAGCTTCCTAGGGACGCATCTGACATACTCGATATCCTCAAAGCCGAGCAAGCCCCTCTCGATCTCTGGCTCATTATCGCGAGGGAGTATTTCAAGCAGGGAAAAATTGATCAATTTCGCCAGATTTTGGAGGAGGGATCCAGCCCTGAAATCGATGACTATTATGCTGACGTTAGGTATGAGAGGATTGCTATCTTAAATGCCCTTGGGGCTTACTATAGCTACCTTGGGAAAATAGAGACAAAACAAAGAGAAAAGGAGGAGCATTTCATTTTGGCGACTCAATACTACAATAAAGCATCAAGGATTGACATGCATGAGCCCTCCACTTGGGTTGGGAAAGGTCAGCTTTTGCTTGCAAAGGGAGAAGTTGAGCAGGCATCTGCTGCGTTTAAGATTGTGTTAGATGGAGATCGTGATAATGTTCCTGCTCTTCTGGGCCAGGCTTGTGTTGAGTTCAACCGTGGACGATATTCTGATTCACTTGAGTTGTACAAGAGGGCATTGCAAGTGTATCCCAATTGTCCTGCACCTGTTAGACTCGGCATAGGTCTTTGTCGCTACAAATTAGGTCAATTTGAAAAGGCTCAACAGGCATTTGAGCGTGTTTTGCAGGCAAATCCAGAAAATGTTGAGGCTCTTGTTGCTCTTGCAATAATGGACTTACGGACTAATGAAGCTTCTGGAATTAGGAATGGAATGATAAAGATGCAGAGGGCATTTGAGATATATCCATACTGTGCAATGGCACTGAACTATCTTGCAAATCATTTTTTCTTCACTGGTCAACATTTTTTAGTTGAGCAACTTACTGAAACTGCATTAGCTGTCACCAATCATGGCCCGACGAAGTCTCATTCTTATTACAATTTAGCACGCTCCTACCATAGCAAGGGGGACTATGACAAAGCTGGGGTGTATTATATGGCATCTGTCAAGGAAGTCAACAAGCCCCATGAATTTGTGTTTCCTTATTATGGTTTGGGACAAGTACAATTGAAGTTAGGAGATTTTAAAAGTGCATTATCAAACTTTGAAAAAGTTTTGGAGGTGTACCCTGATAATTGCGAGACATTGAAGGCACTCGGGCACATATATGTTCAGCTTGGTCAGTCTGACAAGGGCCAGGAGTTCATTAGGAAAGCAACAAAAATTGATCCCCGTGATGCACAGGCATTTCTTGAACTGGGGGAATTGTTAATTCTGTCTGACACAGGAGCTGCACTGGATGCATTTAAAACTGCTCGTACGCTTTTTAAGAAGGGAGGCCTTGAAGTGCCAATTGAGTTATTAAATAATGTTGGTGTTCTTCAGTTTGAAAGGGGAGAATTTGAGCTTGCTCAACAAACTTTCAAGGAGGCTCTAGGCGATGGCATATGGCTTTTTCTTATAAATGAGGAAAATAAGTCTTCCGCTGATGCTGCTACTTCTACACTTCAGTTCAAGGACATGCAATTGTTTCATAAACTTGAAAGTAATGGTCACCTCATCGAAGTACCTTGGGATAAAGTTACAGTGCTCTTTAACCTCGCCAGATTATTTGAGCAGTTAAATGAATCTGGAACTGCAAGCATATTATATCGCTTAATATTATTCAAGTACCCAGACTATGTTGATGCGTACCTGAGGCTAGCTGCTATTGCAAAAGCTCAAAACAACATTCTGTTGAGCATCGAGCTGGTTCATGATGCCCTAAAGGTAAACGATAAGTGTCCCAATGCATTATCTATGCTTGGTGACTTGGAGTTGAAAAATGATGACTGGGTAAAGGCGAAAGAAACTCTTAGGGCAGCTAGTGATGCAACGGATGGGAAGGATTCATATGCTACTCTTGCTCTAGGAAACTGGAATTACTTCGCAGCAGTTCGCAATGAGAAGAGAAATCCAAAGCTAGAAGCAACTCACTTGGAGAAGGCCAAGGAACTCTACACTAGAGTTCTGATTCAGCATTCTGCTAATCTATATGCTGCAAATGGTGCTGGCGTAGTTTTAGCAGAAAAAGGCCATTTTGATGTTTCCAAGGATATCTTCACTCAGGTTCAAGAAGCTGCAAGTGGCAGTGTTTTTGTCCAGATGCCTGATGTCTGGATAAATTTGGCCCATGTCTACTTTGCTCAGGGGAATTTCGCTTTGGCTGTGAAAATGTATCAGAACTGCTTGCGGAAGTTCTATTATAACACAGACTCACAAATACTTCTATATTTAGCTCGTACTCATTATGAAGCTGAACAGTGGCAGGACTGTATAAAGACTCTACTTAGAGCCATCCACTTGGCCCCCTCAAATTATACGTTAAGGTTTGATGCAGGGGTTGCGATGCAAAAATTTTCAGCATCAACGCTACAGAAGGCAAAGAGGACTGCAGATGAGGTTCGAGCAACTGTTGCTGAGCTGCAAAATGCCGTACGCATATTTAGTCAGTTGTCTGCTGCATCCAACCAACATATTCATGGGTTTGATGAGAAGAAAATCGACACGCATGTCGGATACTGCAACCATTTACTTTCAGCTGCAAAAGTTCATCTTGAAGCAGCTGAGCGTGAGGAGCAGCAATTACGACAGAGGCAAGAACTTGCTCGTCAGGTTGCATTGGCTGAGGAAGCAAGGCGTAAGGCTGAAGAGCAAAGGAAATTTCAGATGGAAAGGAGAAAACAAGAGGATGAGCTAAAGAGAGTGCAACAACAGGAGGAACATTTTAGGCGTGTTAAGGAACAATGGAAGAGCAGCACACATTCGAAACGGAGGGAAAGGTCAGATGATGAAGAGGGCGAGAATGCTGAGAAAAAGAGAAGAAAAAGTGGAAAGAAGAGAAAGAAGGATAAGCACTCAAAATCACGCAATGACACAGATGAAGCAGAAGGTGATATGATGAATGAACAAGAAATGGAGGATGCTGATGTTGACAATTTCAGGGAGCCCCAAACTATGGAGAATGATGATGCTGATGAGAATGCTCAGGGTCTTCTTGCAGCAGCTGGACTTGAAGATTCTGATGCAGAAGATGAGACGGCTGCACCCTCCTCAAACGTTGCCCGCCGGCGGCAAGCTTTATCTGAATCTGATGACGACGAACCATTACAGAGGCAATCAAGTCCTACAAGAGAAAATTCTGTTGATATGCAGTTGAGTGATGGAGAAATAAGGGAGGGTAAAACAAATGGAGATGGTGCCAGTGAAGAGGATTAA 3468 0.4311 MKSTKIHLQHILDHVSYSMGTKKAEPTSLKVTCAGQIKVRLKTVACRSWQSVMEEIGSVFNWAESIGFKKEIMHFLTVFAKHKNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFRQILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSDSLELYKRALQVYPNCPAPVRLGIGLCRYKLGQFEKAQQAFERVLQANPENVEALVALAIMDLRTNEASGIRNGMIKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQLKLGDFKSALSNFEKVLEVYPDNCETLKALGHIYVQLGQSDKGQEFIRKATKIDPRDAQAFLELGELLILSDTGAALDAFKTARTLFKKGGLEVPIELLNNVGVLQFERGEFELAQQTFKEALGDGIWLFLINEENKSSADAATSTLQFKDMQLFHKLESNGHLIEVPWDKVTVLFNLARLFEQLNESGTASILYRLILFKYPDYVDAYLRLAAIAKAQNNILLSIELVHDALKVNDKCPNALSMLGDLELKNDDWVKAKETLRAASDATDGKDSYATLALGNWNYFAAVRNEKRNPKLEATHLEKAKELYTRVLIQHSANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYYNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRIFSQLSAASNQHIHGFDEKKIDTHVGYCNHLLSAAKVHLEAAEREEQQLRQRQELARQVALAEEARRKAEEQRKFQMERRKQEDELKRVQQQEEHFRRVKEQWKSSTHSKRRERSDDEEGENAEKKRRKSGKKRKKDKHSKSRNDTDEAEGDMMNEQEMEDADVDNFREPQTMENDDADENAQGLLAAAGLEDSDAEDETAAPSSNVARRRQALSESDDDEPLQRQSSPTRENSVDMQLSDGEIREGKTNGDGASEED* 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1436 1155 Gene3D Tetratricopeptide repeat domain 589 784 IPR011990 GO:0005515
Aev04g1436 1155 MobiDBLite consensus disorder prediction 969 1155 - -
Aev04g1436 1155 SUPERFAMILY HCP-like 276 509 - -
Aev04g1436 1155 Gene3D Tetratricopeptide repeat domain 785 909 IPR011990 GO:0005515
Aev04g1436 1155 SUPERFAMILY TPR-like 591 867 IPR011990 GO:0005515
Aev04g1436 1155 SMART tpr_5 787 820 IPR019734 GO:0005515
Aev04g1436 1155 SMART tpr_5 522 562 IPR019734 GO:0005515
Aev04g1436 1155 SMART tpr_5 271 304 IPR019734 GO:0005515
Aev04g1436 1155 SMART tpr_5 236 269 IPR019734 GO:0005515
Aev04g1436 1155 SMART tpr_5 379 412 IPR019734 GO:0005515
Aev04g1436 1155 SMART tpr_5 202 235 IPR019734 GO:0005515
Aev04g1436 1155 SMART tpr_5 632 665 IPR019734 GO:0005515
Aev04g1436 1155 SMART tpr_5 598 631 IPR019734 GO:0005515
Aev04g1436 1155 SMART tpr_5 823 856 IPR019734 GO:0005515
Aev04g1436 1155 SMART tpr_5 416 449 IPR019734 GO:0005515
Aev04g1436 1155 SMART tpr_5 450 483 IPR019734 GO:0005515
Aev04g1436 1155 SMART tpr_5 666 699 IPR019734 GO:0005515
Aev04g1436 1155 SUPERFAMILY TPR-like 189 319 IPR011990 GO:0005515
Aev04g1436 1155 ProSiteProfiles TPR repeat profile. 416 449 IPR019734 GO:0005515
Aev04g1436 1155 ProSiteProfiles TPR repeat profile. 450 483 IPR019734 GO:0005515
Aev04g1436 1155 Pfam Tetratricopeptide repeat 792 855 - -
Aev04g1436 1155 ProSiteProfiles TPR repeat profile. 236 269 IPR019734 GO:0005515
Aev04g1436 1155 Gene3D Tetratricopeptide repeat domain 412 587 IPR011990 GO:0005515
Aev04g1436 1155 Gene3D Tetratricopeptide repeat domain 60 411 IPR011990 GO:0005515
Aev04g1436 1155 Coils Coil 875 895 - -
Aev04g1436 1155 Pfam Tetratricopeptide repeat 427 486 - -
Aev04g1436 1155 Pfam Tetratricopeptide repeat 249 310 - -
Aev04g1436 1155 ProSiteProfiles TPR repeat region circular profile. 271 304 - -
Aev04g1436 1155 PANTHER RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 83 1117 IPR031101 GO:0006355|GO:0016570
Aev04g1436 1155 MobiDBLite consensus disorder prediction 1109 1123 - -
Aev04g1436 1155 MobiDBLite consensus disorder prediction 1135 1155 - -
Aev04g1436 1155 MobiDBLite consensus disorder prediction 969 1023 - -
Aev04g1436 1155 ProSiteProfiles TPR repeat profile. 787 820 IPR019734 GO:0005515
Aev04g1436 1155 ProSiteProfiles TPR repeat profile. 271 304 IPR019734 GO:0005515
Aev04g1436 1155 Pfam Tetratricopeptide repeat 380 407 IPR019734 GO:0005515
Aev04g1436 1155 Coils Coil 929 996 - -
Aev04g1436 1155 ProSiteProfiles TPR repeat region circular profile. 416 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1436 Aev-Chr4 10117383 10139867 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1436 K15176 - gmx:100794371 1926.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1436 04 10117383 10139867 Aev04g1436 04 10117383 10139867 ECH