Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1417 ATGATGTTGTCAAAATTTGAAGCTGGTAAGAAGAGTAGTGGTAGTGGTGGTTCTGGTAGTAGTAACCAGAGGAAGTTGTTGAAAGATGTTGATACTATGAGCAAAGCTCTTTACTCGGATAGAAGTTCTTCTAGGAATTTAATTTCTTCTGCTGCTAGCTCTCGATCCAAACCCCTTTTGTCTGATCCCAAATCGAGGCCTAAAGCCGGCAATAGCGACGATAGCAATTTGCTTAAGGATAAGGATAAGAAGTCCATATGGAATTGGAGGCCATTGAAGGCCCTTTCACACATCCGCAATAAGAGGTTCAATTGTAATTTTCATCTCCATGTCAATTTGATAGAAGGGTTGCCTTCAAATTTCAACGGCACAAGCCTTTCTGTGTATTGGAAAAGGCGCGACGGGGTTTTGGTTACTCGTCCGGCAGTGGTGGTTGAAGGAAAGGCTGAATTTGAAGAGAAGTTGACTTACACTTGCTCAGTGTATGGTAGTAGGAGTGGACCTCACCATTCGGCAAAGTATGAGGCGAAGCATTTTTTGCTCTATGCTTCTCTTGTTAGTGCACCGGAGCTTGATTTGGGGAAGCATCGGGTGGATCTCACAAGGTTGCTTCCTCTCACACTCGAGGAGCTTGAGGAGGAGAAGAGCTCGGGGAAGTGGACTACAAGTTTTAGGTTAACGGGAATGGCTAAGGGGGCGGTGATGAATGTTAGCTTTGGGTATGTGGTGGTTGGTGATAATGCTGGTGCAACCAGAGATAGCCATAATGCTCTGAGTGTATCGACTTCGAGGCAGGGTAGTCTTGCTGCAGTGAGGCCAGATGTTAAATCCAGACAGTTTGATGGAAGTAGCAGTATGAGGCGTGCTGGAAGTTTGCAAAGCTTTACCAGTTCATATTCGTCCCGAGCTGTAGATGAGGTAAAGGATCTTCACGAGGTGTTGCCAACATCAAAGTCAGCACTTGCCAGCTCAATAGACTTGTTGTATAGGAAATTTGATGAAGATCAGGCACGTATGCCTCCAGAGGATGAACCTGCATTTGATGTATTTACTGAAAATCTTGAGCCAATCAAACCAGATGCATATCCTTCATCTGCCCTTGGAAAGGAAAAGCCTGACGAGCATGTGGGTGATGATGGAGATACAGATCCAGTGCATGACAAGCCTGAAATCAATGTATTTCATGAAAAATTGGAGACCGTCAAACCAGATGGCTATCCCCTACCTGATTCTGCAAAAGAAAACCCAGAAGAGTGTCAAAGTAATGAGTTTTGTGTTGTTGATAAGGGCATAGAATTGTCATCAAACGAACCTGTTAGACTAGAGGAGTCCATGAAATTGGCTTGTGAGGATTCTCCTGCAGTTGATAGTATATGTAACCTTGATACAGTAGCTCTACAAGTGTTTTCTGAAGATAGTTTTAAACATGATTCTGTAGATGAGATAAATGATGATTCCAATCATCAAGCAGTGGCTCACGAAATTGCTAGCAAAGAGGATGGTTTATACACTAAAGAACTGCTCCTGCAAGAATTAGAGTTGGCTTTAAACAGTGTCTCAGATTTGGAGACAGCGGCCCTAGACTCTCCTGAAATTATGGAAGTCAAATCTGAATATAAGATGAGAAAATCAAATAGCTTGGATGATGTTACAGAATCAGTTGCCAATGAATTTTTGAACATGCTAGGCATGGAACAAAGTTCAATGGGCTTGAGTTCTGAAAGCGAGCCCGAATCTCCCAGAGAGCTCCTTTTAAGACAATTTGAGAAGGAGGCTCTGGATGGGGGCTTCTCTTTATTCGACTTTGACAACGACTATGATAATGATGTGGATGGTAGCTATGATGCTTCTAATGAATCTGAGTACTGGAACTTCTCTGAGGGTATTGGATCATCATCATCCTTGTTCCAAGATCTGAAGGAGGAGCGGCCAGTTGAGTCTCAGGACGTGAAGGGAAAACAGAGGGCTCAGATGCTAGAAGACTTGGAAACAGAAGCCTTAATGCGCGAATGGGGTTTGAATGAGAAGGCTTTTCATCATTCTCCACCAAAAGATGGTTTTGGAAGTCCAATTCATTTACCACCTGAAGAGCCTCCCACATTGCCCCCTCTTGCTGATGGATTGGGCTCTTTTCTTCAAACAAAAGACGGGGGGTTTGTACGGTCTATGAATCCATCGCTTTTCCAGAATGCTAAAAGTGGTGGGAGCTTAATTATGCAGGTTTCGAACCCTGTTGTGGTACCTGCAGAAATGGGTTCTGGTGTAATGGAGGTTTTGCAGGGTTTAGCCTCTGTGGGAATTGAAAAGCTCTCAATGCAGGCAAAGGAATTAATGCCTTTGGAAGATATCACAGGGAAGACAATGCAACAAGTAGCATGGGAAGCTATGCCTTCCTTAGAGGGAGCAGAGAGGCAATCCCATTTGCAGCATGATGTGATAGTAGGGCAGAATAGTACATCCATGCAAACGGACTTGAAAGGAAAACCATCTGGGCCGAAGTCCAGCAAGTTTAATTCAAGCTCAATGGACAGCCCGAGAGAGTCAGAGTTTGTTTCGTTGGAAGATCTTGCTCCACTGGCTATGGATAAAATTGAAGCACTTTCGATGGAGGGTTTAAGAATACAATCTGGAATGTCAGAAGAGGAGGCTCCATCAAACATCATTGCGCAGTCCATTGGCGATATTTCAGCTCTCCAGGGAAAAGGGATTGATATGAACGGGTCGCTCGGTCTGGAAGGAGCTGCTGGTTTGCAGCTGATGGATACAAAAGGCAGCAGCAATGGTGTCGACGGGATAATGGGTCTGTCATTAACTCTTGATGAATGGATGAAACTGGATTCTGGTGAGATTGATGACATCGATAACATCAGTGAGCATACTTCCAAACTTCTCGCGGCCCATCATGCTAACTCTTTTGACTTCATACGTGGGAATTCAAAGGGAGAGAGGAGACGAGGCAAAGGCAGAAAATGTGGTTTGCTAGGGAACAATTTCACCGTAGCATTAATGGTGCAACTCCGTGATCCTCTGAGAAATTATGAGCCAGTTGGAACTCCTATGCTTGCTCTCATACAAGTTGAGAGAGTCTTTGTCCCACCAAAGCCAAAAATTTACTGTACTGTGTCTGAGCTAAGGAACAACAATGATGAGGATGATGAGAGCGAAACAGTAGCTAAGGAGGAGACGAAAGACGACAAGAAACAGGAGAAGAGTTCCGAAGAAGAGGTCATCCCTCAGTTCAAAATTACTGAAGTCCATGTTGCTGGTGTGAAGAATGAACCTCACAAGAATGAGCCTCAGAAAAAGTGGTTTTGGGGTTGGGGGGGCAATTCGAGCCAGCAACAGTCTGGTTCGCGCTGGTTGCTTGCTAATGGAATGGGGAAGAACAATAAGCTTGCGATGAAGTCGAAGGGTGCATCCAAAACTAGTGCTCCGGTTACCACAAAGGTGCAGCCTGGCGACACCTTGTGGAGCTTATCGACTCGAATTTTCGGCAATGGAGCAAAATGGAAGGAATTGGCAGCACTTAATCCGCATATAAGAAACCCCAATGTTATTATACCAGGTGATACCATAAGACTTAGTTAA 3588 0.4443 MMLSKFEAGKKSSGSGGSGSSNQRKLLKDVDTMSKALYSDRSSSRNLISSAASSRSKPLLSDPKSRPKAGNSDDSNLLKDKDKKSIWNWRPLKALSHIRNKRFNCNFHLHVNLIEGLPSNFNGTSLSVYWKRRDGVLVTRPAVVVEGKAEFEEKLTYTCSVYGSRSGPHHSAKYEAKHFLLYASLVSAPELDLGKHRVDLTRLLPLTLEELEEEKSSGKWTTSFRLTGMAKGAVMNVSFGYVVVGDNAGATRDSHNALSVSTSRQGSLAAVRPDVKSRQFDGSSSMRRAGSLQSFTSSYSSRAVDEVKDLHEVLPTSKSALASSIDLLYRKFDEDQARMPPEDEPAFDVFTENLEPIKPDAYPSSALGKEKPDEHVGDDGDTDPVHDKPEINVFHEKLETVKPDGYPLPDSAKENPEECQSNEFCVVDKGIELSSNEPVRLEESMKLACEDSPAVDSICNLDTVALQVFSEDSFKHDSVDEINDDSNHQAVAHEIASKEDGLYTKELLLQELELALNSVSDLETAALDSPEIMEVKSEYKMRKSNSLDDVTESVANEFLNMLGMEQSSMGLSSESEPESPRELLLRQFEKEALDGGFSLFDFDNDYDNDVDGSYDASNESEYWNFSEGIGSSSSLFQDLKEERPVESQDVKGKQRAQMLEDLETEALMREWGLNEKAFHHSPPKDGFGSPIHLPPEEPPTLPPLADGLGSFLQTKDGGFVRSMNPSLFQNAKSGGSLIMQVSNPVVVPAEMGSGVMEVLQGLASVGIEKLSMQAKELMPLEDITGKTMQQVAWEAMPSLEGAERQSHLQHDVIVGQNSTSMQTDLKGKPSGPKSSKFNSSSMDSPRESEFVSLEDLAPLAMDKIEALSMEGLRIQSGMSEEEAPSNIIAQSIGDISALQGKGIDMNGSLGLEGAAGLQLMDTKGSSNGVDGIMGLSLTLDEWMKLDSGEIDDIDNISEHTSKLLAAHHANSFDFIRGNSKGERRRGKGRKCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVERVFVPPKPKIYCTVSELRNNNDEDDESETVAKEETKDDKKQEKSSEEEVIPQFKITEVHVAGVKNEPHKNEPQKKWFWGWGGNSSQQQSGSRWLLANGMGKNNKLAMKSKGASKTSAPVTTKVQPGDTLWSLSTRIFGNGAKWKELAALNPHIRNPNVIIPGDTIRLS* 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1417 1195 MobiDBLite consensus disorder prediction 1059 1076 - -
Aev04g1417 1195 SMART LysM_2 1147 1195 IPR018392 -
Aev04g1417 1195 ProSiteProfiles LysM domain profile. 1146 1194 IPR018392 -
Aev04g1417 1195 MobiDBLite consensus disorder prediction 688 702 - -
Aev04g1417 1195 MobiDBLite consensus disorder prediction 38 60 - -
Aev04g1417 1195 MobiDBLite consensus disorder prediction 367 386 - -
Aev04g1417 1195 MobiDBLite consensus disorder prediction 358 386 - -
Aev04g1417 1195 CDD LysM 1149 1194 IPR018392 -
Aev04g1417 1195 ProSiteProfiles C2 NT-type domain profile. 95 243 IPR019448 -
Aev04g1417 1195 MobiDBLite consensus disorder prediction 818 848 - -
Aev04g1417 1195 Gene3D LysM domain 1138 1195 IPR036779 -
Aev04g1417 1195 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1194 - -
Aev04g1417 1195 Pfam LysM domain 1149 1194 IPR018392 -
Aev04g1417 1195 MobiDBLite consensus disorder prediction 1 26 - -
Aev04g1417 1195 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1194 IPR039614 -
Aev04g1417 1195 MobiDBLite consensus disorder prediction 11 26 - -
Aev04g1417 1195 MobiDBLite consensus disorder prediction 38 77 - -
Aev04g1417 1195 MobiDBLite consensus disorder prediction 818 847 - -
Aev04g1417 1195 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 100 241 IPR019448 -
Aev04g1417 1195 MobiDBLite consensus disorder prediction 1048 1076 - -
Aev04g1417 1195 SUPERFAMILY LysM domain 1146 1194 IPR036779 -
Aev04g1417 1195 MobiDBLite consensus disorder prediction 683 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1417 Aev-Chr4 9951371 9955062 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1417 - - mtr:MTR_2g040970 1538.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2704 01 29843772 29847419 Aev04g1417 04 9951371 9955062 PCT