Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1411 ATGCTCTCTAATGCACTCCCTAGTGCTATTTGTGCTAAAATAGCTGGGGTTCTCCCTCTTGACACTCTAGCGGGGAGGGATATTGTGGCTTGGAAAGGATCTACTGATGGGACCTTCTGTTTCAAGTCCACTTACAACATAATCTATGCCTTTGATGGTCTGGACTCAGATCTGCAATATTGTGCCATTTGGAGATGGGATGGCCCAGAGCGTGTCAAAACTTGCGTTTGGTTGGTTCTTAAAGAGGGTCTCATGACAAATGTTAGGATTGGATTATGTCTAACATCAAGAACAAGAAAAAAGTGCAAGGTAAGTCTTGGGCTTTTTAATTTGGGACTAGTATTCACTTCCTATGGCAAGAGAGAAATGCAGATATCTTTGGGAAGCAAATTCCGTGACAGCAGGGACATTTCCACTCGCTATTGGCTTAGAGTCAAAGGTTTCCTCCATCTGGCTGGGTATGCCTTAATACAGATGGATATATTTGTTAAAAATAATGAGATGGCGGCTTGTGGTGGTTTGATTAGGGACGACTCCGGCAGCTTCCTTGGGGGTTTCACAGCAAATATGGGAAGAACTTCAATTACCATAGCCGAGCTCGAAGGAGTGCTTTTTGGTCTTGATGCTGCTTGGCATTGTGGCTGCAGGAAGGTGGTTGTGAACTTGGATTCTCAAGTTGGCCTTCGCCTGATCAGTAATCATCTGGAGCCTTCTCACCCGCTGCAAGTGTGGTTAGGAGAATCTCCAATAGATTGGCTAAGGATTGGGATGTGGACATTTTTCATGTTTTTCGTGAAGGGAACAAGACTGCAGATGCATTGGCAAAACTTGGTTTTAGCTATAGATGCTGCTATGGAAGAGACTGTTAATTTGAGAAATGGCGTGGAATTGGCAACGTCAGTCTCTGATAAACATCTTGATCTTCTGAGACCTTCTGCTCGAAGTTATTCAACTTTTAGAGCTCAAGCTATGGATGCTGGAGACGAAGAAAAGGGGAAATATTCCCTCATTAGAGATCCCGAGGACTTCCAAATGGGACTTTATGACAAACCGCTTCCATGTTATGGATGCGGAATTGGATGGTTCTCATTTCTTTTTGGATTTCTATGTCCACTTTTGTGGTATTATGCGACAATTCTCTATTTTGGAAATTACTATCGGAAGGATCCTAGGGAACGGGCAGGCATTAGTATGCACTGTAGCATTGGTGATCGTAGCAGTTATTCTTCTGTTTGGGTCCCTCTGATTCTAATTCTAGTACTGCTGTGA 1269 0.435 MLSNALPSAICAKIAGVLPLDTLAGRDIVAWKGSTDGTFCFKSTYNIIYAFDGLDSDLQYCAIWRWDGPERVKTCVWLVLKEGLMTNVRIGLCLTSRTRKKCKVSLGLFNLGLVFTSYGKREMQISLGSKFRDSRDISTRYWLRVKGFLHLAGYALIQMDIFVKNNEMAACGGLIRDDSGSFLGGFTANMGRTSITIAELEGVLFGLDAAWHCGCRKVVVNLDSQVGLRLISNHLEPSHPLQVWLGESPIDWLRIGMWTFFMFFVKGTRLQMHWQNLVLAIDAAMEETVNLRNGVELATSVSDKHLDLLRPSARSYSTFRAQAMDAGDEEKGKYSLIRDPEDFQMGLYDKPLPCYGCGIGWFSFLFGFLCPLLWYYATILYFGNYYRKDPRERAGISMHCSIGDRSSYSSVWVPLILILVLL* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1411 422 PANTHER 60S RIBOSOMAL L18A-LIKE PROTEIN 283 409 - -
Aev04g1411 422 Pfam Reverse transcriptase-like 162 236 IPR002156 GO:0003676|GO:0004523
Aev04g1411 422 Gene3D - 161 283 IPR036397 GO:0003676
Aev04g1411 422 CDD RNase_H_like 169 245 IPR044730 -
Aev04g1411 422 PANTHER - 283 409 - -
Aev04g1411 422 SUPERFAMILY Ribonuclease H-like 164 240 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1411 Aev-Chr4 9897126 9905838 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1411 - - gmx:100791750 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2698 01 29812836 29813827 Aev04g1411 04 9897126 9905838 PCT