Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1398 ATGGAGTGCCTTGGAGCGAGGAACTTCGCGGCAATGGCGGTTGGTTTAAGCGCTTCTTCCAGGAACCGTTTGCGGAGGAAGAATCTATCGAGAATTCGAACTTCGCTGCTCGTACATGGAATTTGTTGGAATAATTATCGTCATCATCATCATCGTCATCATAATAATCAATTTTCACGCTCGCATTGTGTGAGGGTGGAGGCTAAAGCTGGTGCAGGGAGCGAGAGCTGCGTGGCGACAAAGGAGGATTTCGCCGATGAAGAAGATTACGTCAAGGCTGGTGGTTCTGAACTCGTTTTCGTCCAAATGCAGCAGAATAAGGACATGGAGTTGCAGTCCAAGCTTGCCGATAAGTTGCCACCGATATCTACAGGCGACGGCATACGAGATCTCGTGGTAATTGGTTGTGGGCCGGCTGGTCTTGCTCTTGCTGCAGAATCTGGCAAGTTAGGATTGAAAGTTGGGCTTATTGGTCCTGATCTACCTTTCACAAATAATTATGGTGTGTGGGAGGACGAATTTAAAGATCTTGGACTTGAAGGTTGTATTGAGCATGTTTGGAAGGATACCATTGTATATCTTGATAATAAGGACCCCATTTTCATTGGACGTTCTTATGGCCGTGTCAGTAGACATATGCTTCATGAGGAATTGTTAAGAAGGTGTGTCGAGTCAGGTGTATCATATCTTAGCTCAAGAGTAGAAAGGATTGCTGAGGCAAGCAATGGTCTCAGTCATGTTGTCTGTGAATATGATAATGTTGTGCCCTGCAGGCTTGTTACTGTTGCATCAGGAGCAGCTTCAGGGAAACTGTTGCAGTATGAAGTTGGGGGTCCAAAGGTGTCTGTCCAAACAGCTTACGGCGTTGAAGTTGAGGTGGAAAACAATCCTTATGATCCAAACCTGATGGTTTTCATGGATTACAGAGACTACATGAAGCAAAAAGTTCAATGTCTAGAAGCAAACTACCCGACATTTCTTTATGCAATGCCCATGTCTCGTACAAGAGTGTTCTTTGAGGAAACCTGTTTGGCATCAAAAGATGCCATGCCTTTTGATTTATTAAAGAAAAAGCTCTTTTCAAGATTGAATACTATGGGGATCAGAATTACAAAAACTTATGAAGAGGAATGGTCTTATATCCCGGTTGGTGGATCCCTACCCAACACAGAGCAAAAGAACCTTGCATTTGGTGCAGCTGCCAGTATGGTGCATCCAGCTACAGGCTACTCAGTTGTGAGATCTTTGTCAGAAGCTCCAAAATATGCTTCAGTTATTGCTACTATTTTGAAAGAGGGCCATGCAAAGAACATTATTACTCACGAAAGAAGTAGAGTAAATCTATCTATGCAAGCTTGGGATACACTTTGGCCACAAGAAAGGAAACGACAGAGAGCATTCTTTCTATTTGGATTAGCATTAATTCTGCAGCTGGACATTGAGGGCATTAGAACCTTCTTTCGTACTTTCTTTCGCTTACCTGATTGGATGTGGAAGGGATTTCTTGGCTCCTCTCTCTCCTCTAGAGACCTAGTATTGTTTGCATTCTACATGTTCATAATAGCGCCAAATGACTTGAGAATGTGTCTAGTTAGACACCTGGTTTCAGATCCTACAGGGTCCACTATGATAAGGACCTATTTAACGATATAG 1653 0.4332 MECLGARNFAAMAVGLSASSRNRLRRKNLSRIRTSLLVHGICWNNYRHHHHRHHNNQFSRSHCVRVEAKAGAGSESCVATKEDFADEEDYVKAGGSELVFVQMQQNKDMELQSKLADKLPPISTGDGIRDLVVIGCGPAGLALAAESGKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLEGCIEHVWKDTIVYLDNKDPIFIGRSYGRVSRHMLHEELLRRCVESGVSYLSSRVERIAEASNGLSHVVCEYDNVVPCRLVTVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPNLMVFMDYRDYMKQKVQCLEANYPTFLYAMPMSRTRVFFEETCLASKDAMPFDLLKKKLFSRLNTMGIRITKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIATILKEGHAKNIITHERSRVNLSMQAWDTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPDWMWKGFLGSSLSSRDLVLFAFYMFIIAPNDLRMCLVRHLVSDPTGSTMIRTYLTI* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1398 550 Pfam Lycopene cyclase protein 130 527 - -
Aev04g1398 550 Gene3D - 129 476 IPR036188 -
Aev04g1398 550 PANTHER - 1 496 - -
Aev04g1398 550 SUPERFAMILY FAD/NAD(P)-binding domain 128 523 IPR036188 -
Aev04g1398 550 PRINTS Pyridine nucleotide disulphide reductase class-I signature 260 269 - -
Aev04g1398 550 PRINTS Pyridine nucleotide disulphide reductase class-I signature 130 152 - -
Aev04g1398 550 PANTHER BNAC09G53690D PROTEIN 1 496 - -
Aev04g1398 550 TIGRFAM carotene-cycl: lycopene cyclase family protein 130 529 IPR010108 GO:0016117|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1398 Aev-Chr4 9815439 9820339 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1398 K06444 - gmx:100790686 910.983