Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1384 ATGGTGGTGAGGCTTCGATTATCTCGTTTCGGGTGTAAGAACAAGCCATTCTATCGAGTCATGGCTGCTGATAGCAGATCCCCTAGAGATGGCAAGCACCTCGAAGTTCTTGGTTACTACAATCCCTTGCCAGGCCAAGATGGCGAAAAAAGAATGGGTCTCAACTTTGATAGGGTCAAGTATTGGCTTTCTGTTGGAGCTCAACCTTCAGATCCTGTAGAGCGTCTTTTATTCCGGGCAGGGTTATTGCCCCCGCCACCAATGTTGGCAATGGGACGTAAAGGTGGACCACGCGATACACGCCCTGTGGATGCATTAACTGGGCGCATCCTGAATCAAGAGAAACCAACTACTTCCAACAAGAATGAAGATGATGGCAAACAGGAAACTCCCGCACCTGAAAACCCATGA 411 0.4891 MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGEKRMGLNFDRVKYWLSVGAQPSDPVERLLFRAGLLPPPPMLAMGRKGGPRDTRPVDALTGRILNQEKPTTSNKNEDDGKQETPAPENP* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1384 136 PANTHER 30S RIBOSOMAL PROTEIN S16-LIKE 1 121 - -
Aev04g1384 136 Hamap 30S ribosomal protein S16 [rpsP]. 2 80 IPR000307 GO:0003735|GO:0005840|GO:0006412
Aev04g1384 136 MobiDBLite consensus disorder prediction 118 136 - -
Aev04g1384 136 MobiDBLite consensus disorder prediction 84 136 - -
Aev04g1384 136 PANTHER 30S RIBOSOMAL PROTEIN S16 1 121 IPR000307 GO:0003735|GO:0005840|GO:0006412
Aev04g1384 136 Pfam Ribosomal protein S16 9 70 IPR000307 GO:0003735|GO:0005840|GO:0006412
Aev04g1384 136 Gene3D - 1 134 IPR023803 -
Aev04g1384 136 SUPERFAMILY Ribosomal protein S16 3 94 IPR023803 -
Aev04g1384 136 TIGRFAM S16: ribosomal protein bS16 3 82 IPR000307 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1384 Aev-Chr4 9685365 9686495 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1384 K02959 - gmx:100305630 235.343