Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1382 ATGGCGAGGTTGTTTCGTAACACTCCACTCTTCAGACGCCTGAATGCATTTCTAGCTTTTGAAGAACCAGTTAGTTATGGCTTCAAACCAGGAATGTTGGGGACGTCTTATGTTTTGAGCTTTTCAACTAAAGGTAGAAAGCGCTCTAAATCAGATGGAAGTGACTCATGTGAAGAGAACATGTCTAAGAAAGATTTGGCCCTGCAACATGCCATGGATCAGATCACTTCTTCATTTGGAAAGGGTTCTATCATGTGGCTTGGGCGTTCTGTCTCACCAAAAAATGTACCTGTGCTGTCCACTGGTTCTTTTGCCCTTGATATAGCTCTGGGAGTTGGTGGTCTTCCAAAGGGACGTGTTGTGGAAATATTTGGACCAGAGGCTTCTGGGAAAACAACTCTTGCATTACATGTGATTGCAGAGGCACAGAAGCTAGGAGGTTATTGTGCCTTTGTTGATGCTGAGCATGCACTTGACAAGGCACTTGCAGAGTCAATTGGTGTAAATACTGAGAACTTGCTTCTATCACAACCAGATTGTGGTGAACAAGCACTTAGCCTTGTGGATACCTTAATCAGGAGTGGTTCAGTTGATGTAATTGTTGTTGACAGTGTGGCTGCTCTAGTTCCTAAAGGTGAACTTGATGGTGAGATGGGTGATGCTCACATGGCTATGCAGGCCAGGTTGATGAGCCAGGCACTTCGGAAGTTGTGCCACTCCTTGTCACTTTCACAATGTATATTGATTTTTATAAATCAGGTGAGGTCAAAGCTTTCTACTTTTGGGTTCGGTGGGCCAACTGAAGTTACTTGTGGTGGTAATGCATTGAAATTTTATGCTTCTGTTAGGCTAAACATCAAAAGAGTAGGGCTTGTGAAGAAGGGTGAAGAGACTATAGGAAGCCAGGTTCAGGTTAAGGTTGTGAAGAACAAGCTTGCACCTCCATTTAAAACTGCACAGTTTGAGCTTGAGTTTGGTAAGGGTATAAGCAGAGAAGCAGAGATCATAGATTTGAGCCTAAAACACAAGCTCATCTCAAAGAGCGGTGCATATTATGGATATAACGGCAAGAATTTCCTCGGTAAGGATGCTCTGAAGAGGTTCTTGGCTGATGGTGATAATGCTCAAGATTTAACAACAAAGCTCAGGGAAAAGCTTCTTAATGCTGAGGCAGAAGTGGTCCCAGAGGCACATGCAGTGATTGGAGATGTTGCAGAAGTAACTGTGTCTCCAGATTCTACCGATGAAGAAGCAGCTGTTGCTGCATAG 1269 0.4374 MARLFRNTPLFRRLNAFLAFEEPVSYGFKPGMLGTSYVLSFSTKGRKRSKSDGSDSCEENMSKKDLALQHAMDQITSSFGKGSIMWLGRSVSPKNVPVLSTGSFALDIALGVGGLPKGRVVEIFGPEASGKTTLALHVIAEAQKLGGYCAFVDAEHALDKALAESIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLCHSLSLSQCILIFINQVRSKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRVGLVKKGEETIGSQVQVKVVKNKLAPPFKTAQFELEFGKGISREAEIIDLSLKHKLISKSGAYYGYNGKNFLGKDALKRFLADGDNAQDLTTKLREKLLNAEAEVVPEAHAVIGDVAEVTVSPDSTDEEAAVAA* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1382 422 Pfam recA bacterial DNA recombination protein 67 330 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev04g1382 422 SMART AAA_5 117 290 IPR003593 -
Aev04g1382 422 CDD recA 63 388 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev04g1382 422 PANTHER REPAIR PROTEIN RECA, PUTATIVE-RELATED 1 411 - -
Aev04g1382 422 ProSiteProfiles RecA family profile 2. 263 334 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Aev04g1382 422 TIGRFAM tigrfam_recA: protein RecA 64 382 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev04g1382 422 Hamap Protein RecA [recA]. 64 401 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev04g1382 422 ProSiteProfiles RecA family profile 1. 95 254 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Aev04g1382 422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 329 IPR027417 -
Aev04g1382 422 PANTHER RECA 1 411 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev04g1382 422 Gene3D - 94 391 IPR027417 -
Aev04g1382 422 SUPERFAMILY RecA protein, C-terminal domain 330 384 IPR023400 -
Aev04g1382 422 PRINTS RecA protein signature 225 254 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev04g1382 422 PRINTS RecA protein signature 187 216 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev04g1382 422 PRINTS RecA protein signature 305 334 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev04g1382 422 PRINTS RecA protein signature 272 300 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev04g1382 422 PRINTS RecA protein signature 153 182 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev04g1382 422 ProSitePatterns recA signature. 275 283 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1382 Aev-Chr4 9668662 9672602 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1382 K03553 - gmx:100798983 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2681 01 29721185 29724758 Aev04g1382 04 9668662 9672602 PCT