Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1364 ATGGAGGCTCCTCCTTCAGCCGGTGGCGCCGTGCAACAAAGTGGTGGTGGTGTTGTGAAGAAGAAGGAGACAAGGGGACGAAAACCTAAGCCCAAGGACGAACAACAAGGCAAGACCTCGAAGAAGACCCAACAGCAGCATCAACAGCAACAGCAACACCATTCCGTTGACGAGAAGTACTCTCAGTGGAAATCCCTTGTCCCTGTTCTCTACGATTGGCTCGCTAATCACAACCTCGTCTGGCCCTCTCTTTCATGCCGGTGGGGTCCTCAGTTGGAACAAGCTACTTACAAGAATCGCCAGCGTCTCTACCTCTCTGAGCAGACTGATGGCAGTGTTCCAAATACGCTGGTCATTGCGAATTGTGAGGTTGTCAAGCCTAGGGTTGCAGCTGCAGAGCACATTTCACAGTTTAATGAAGAGGCACGCTCCCCATTCGTCAAGAAGTACAAGACCATCATTCATCCTGGAGAGGTGAACAGAATTAGGGAGTTGCCGCAAAACTCTAAGATAGTGGCTACTCATACGGACAGCCCTGATGTCCTCATTTGGGATGTTGAAAGTCAACCTAACCGTCATGCTGTACTTGGAGCCTCAAACTCTCGCCCAGACTTGGTATTGACTGGGCACCAAGATAATGCGGAATTTGCCCTTGCAATGTGCCCAACTGATCCCTATGTGCTTTCAGGAGGAAAGGACAAAACGGTGGTGCTGTGGAGTATTGAAGACCATATAACATCTTCTGCCACTGACCCCAAATCAAGTGGGTCTATTATCAAACAGAACTCCAAATCCGGGGAAGGCAATGATAAACCTGCTGATGGCCCTTCTGTTGGACCACGGGGAATCTATTGTGGCCATGAGGATACCGTTGAAGATGTGACTTTCTGCCCTTCTAGTGCACAGGAGTTCTGTAGCGTTGGAGATGATTCTTGCCTCATATTATGGGATGCCCGTGTTGGCTCTAGTCCTGTCGTTAAGGTTGAAAAGGCTCATAATGCTGATCTTCATTGTGTTGACTGGAATCCTCATGATGTTAATCTGATTCTTACTGGGTCGGCAGATAATTCTGTTCGCATGTTCGATCGACGCAATCTGACCTCTAATGGAGTTGGGTCACCCATCCATAAATTTGAGGGTCACAAAGCTGCTGTTCTTTGTGTTCAGTGGTCTCCGGACAAAGCATCTGTATTTGGAAGTTCAGCAGAAGATGGTCTCTTGAACATTTGGGACTATGAGAAGGTTGGTAAAAAGATAGAACGATCTGGGAAATCAAATTCTCCACCAGGGTTGTTTTTCCAGCATGCAGGTCATAGGGATAAAGTAGTTGACTTTCACTGGAATGCACAAGATCCATGGACAATTGTTAGTGTGTCTGATGATTGCGAAAGTACTGGCGGAGGGGGAACTTTACAGATATGGCGCATGAGTGATTTGATCTACAGACCAGAAGAGGAGGTTTTGGCAGAGCTGGAGAAATTCAAATCTCATGTGTTAGCTTGTGCTTCGAAGTCCGAAAAGTGA 1524 0.4738 MEAPPSAGGAVQQSGGGVVKKKETRGRKPKPKDEQQGKTSKKTQQQHQQQQQHHSVDEKYSQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVESQPNRHAVLGASNSRPDLVLTGHQDNAEFALAMCPTDPYVLSGGKDKTVVLWSIEDHITSSATDPKSSGSIIKQNSKSGEGNDKPADGPSVGPRGIYCGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGSSPVVKVEKAHNADLHCVDWNPHDVNLILTGSADNSVRMFDRRNLTSNGVGSPIHKFEGHKAAVLCVQWSPDKASVFGSSAEDGLLNIWDYEKVGKKIERSGKSNSPPGLFFQHAGHRDKVVDFHWNAQDPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEEEVLAELEKFKSHVLACASKSEK* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1364 507 ProSiteProfiles Trp-Asp (WD) repeats profile. 329 362 IPR001680 GO:0005515
Aev04g1364 507 PANTHER WD-40 REPEAT-CONTAINING PROTEIN MSI4 31 504 - -
Aev04g1364 507 PANTHER WD40 REPEAT FAMILY 31 504 - -
Aev04g1364 507 SUPERFAMILY WD40 repeat-like 145 501 IPR036322 GO:0005515
Aev04g1364 507 Pfam WD domain, G-beta repeat 372 411 IPR001680 GO:0005515
Aev04g1364 507 Pfam WD domain, G-beta repeat 282 317 IPR001680 GO:0005515
Aev04g1364 507 Pfam WD domain, G-beta repeat 330 362 IPR001680 GO:0005515
Aev04g1364 507 Pfam WD domain, G-beta repeat 206 240 IPR001680 GO:0005515
Aev04g1364 507 ProSiteProfiles Trp-Asp (WD) repeats profile. 284 326 IPR001680 GO:0005515
Aev04g1364 507 ProSiteProfiles Trp-Asp (WD) repeats profile. 378 413 IPR001680 GO:0005515
Aev04g1364 507 MobiDBLite consensus disorder prediction 247 283 - -
Aev04g1364 507 MobiDBLite consensus disorder prediction 247 268 - -
Aev04g1364 507 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 378 413 - -
Aev04g1364 507 SMART WD40_4 146 185 IPR001680 GO:0005515
Aev04g1364 507 SMART WD40_4 322 362 IPR001680 GO:0005515
Aev04g1364 507 SMART WD40_4 371 411 IPR001680 GO:0005515
Aev04g1364 507 SMART WD40_4 200 240 IPR001680 GO:0005515
Aev04g1364 507 SMART WD40_4 277 317 IPR001680 GO:0005515
Aev04g1364 507 SMART WD40_4 428 475 IPR001680 GO:0005515
Aev04g1364 507 Gene3D - 33 493 IPR015943 GO:0005515
Aev04g1364 507 MobiDBLite consensus disorder prediction 1 58 - -
Aev04g1364 507 Pfam Histone-binding protein RBBP4 or subunit C of CAF1 complex 58 124 IPR022052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1364 Aev-Chr4 9472086 9481675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1364 286 470 Miscellaneous Gene Families AT5G08390 26.425 2.86e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1364 K10752 - gmx:100779302 941.799