Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1322 ATGGGAACGCTTCATGGCTTCAGAAGAGCATATGGAGCTCTCAAAGACTCTACCAAGGTTGGCCTTGCCAAAGTTAATAGTGATTACAAGGAATTGGATATTGCAATTGTGAAGGCTACCAATCACGTAGAATATCCTCCAAAGGAACGTCATGTTCGAAAAATATTCTATGCAACCTCTGCACACCAACCACGAGCAGATGTGGCATATTGCATTCACAAACTTTCCAAGAGACTTTACAAGACAAAAAGTTGGGTTGTTGCTATAAAGACATTGATAGTGATTCATAGGATTTTGAGGGAGGGTGATCCTACCTTTAGAGAAGAGCTCCTAAACTACACACGCAGGGGAAACATCCTCCAAGTATCCAATTTCAAAGATGATTCAACCCCTCAAGCTTGGGATTGTTCTGCTTGGGTTCGAACCTATGCACTATTCTTAGAAGAAAGACTTGAATGCTTTAAAACCCTTAAATATAACATTGAGTCAGAGCGTATGCCAAAATCATCATCAGCTTCATCTAGAGCGAATTCAACAACTCAATCTGGTAATGATGATAATAATCTGTTGGAGCAGCTTCCAGCATTGCAGCAACTTCTGAATCGCCTTACTGGTTGTCAACCTGAAGGATGTGCTTATGGAAATTATCTAGTGCAATATGCATTGGCCTTGGTATTGAAAGAGAGCTTCAAGATATACTGTGCACTGAATGATGGAATCATCAATCTTGTGGATTTGTTCTTTGATATGCCAAGACATGATGCAGTGAGGGCTCTAAATATTTACAAAAGAGCTGGCCAACAGGCAGACCTACTTTCTGAATTTTATGAATACTGCAAAGGCTTGAATGTTGCTAGGCATTTTCAATTTCCATCACTGAGACAGCCACCTTCCTCTTTCCTTACAACAATGGAAGAATACATTAAAGAAGCACCCGAGACTGGCTCAGTTTACCAAAGACTGGAGTATCACCAAGAGGATGATCAATCACCTGCTAAAGAAGAAGCAGAAGCAGAAGCAGAACAACCTGAAGAGCCAGAAGAAACTGAAGAAGCTGAAGAAGTTGAGGAGGAAGAACCATCAGAAGAGGAAGAAACAGAGGCAAAGGAAGAGGAAGTTGAGCCTCCTCCTCTGATATCGACCGGTGCAAACAATGATTTTCTGGGTCTGAATGAAATAAATCCAAAAGCTCAACAATTGGAAGAAAGCAATGCTTTGGCACTTGCAATTGCTCAACCTGGAGGAAACAACCAAAACAATCTTGCTTTGAGTAACATTGGTGGGACTACTGGTTGGGAACTTTCATTGGTTACAACACCAAGCAATCATACCAGCCATGCACCAGATCGCAAAATGGCTGGTGGATTTGACAATCTATTACTAGATAGTTTGTATGAAGATGAAAATGCCAGAAGACAACTTCAACTCCAAAATGCAGGTTATGGACATGGTAGTGGAGAAATGGCTGCACAAAACCCATTTGAACATTATAATAATAATCAAAATGATCCATTTGCAATGTCAAACAACATAGCAGCCCCAACCAATGTCCAAATGGCATTAATGGCTCAGCAACAACAACAACAACAAATGATGTTCCAACAACAACAGCAACAACAACAGAACAATAACATGATGATGAATCCTTATCAGAACCAATATTCTCAATACCCTCAACAGATGCAACAAAATATGGGTTCTTACAATCCATTTGGAGATCCTTTACCAGTAGCTAACTATCACCAAGGTTCCTTGCCTCCAAATGGGAATTACAATTTAATGTAG 1785 0.4028 MGTLHGFRRAYGALKDSTKVGLAKVNSDYKELDIAIVKATNHVEYPPKERHVRKIFYATSAHQPRADVAYCIHKLSKRLYKTKSWVVAIKTLIVIHRILREGDPTFREELLNYTRRGNILQVSNFKDDSTPQAWDCSAWVRTYALFLEERLECFKTLKYNIESERMPKSSSASSRANSTTQSGNDDNNLLEQLPALQQLLNRLTGCQPEGCAYGNYLVQYALALVLKESFKIYCALNDGIINLVDLFFDMPRHDAVRALNIYKRAGQQADLLSEFYEYCKGLNVARHFQFPSLRQPPSSFLTTMEEYIKEAPETGSVYQRLEYHQEDDQSPAKEEAEAEAEQPEEPEETEEAEEVEEEEPSEEEETEAKEEEVEPPPLISTGANNDFLGLNEINPKAQQLEESNALALAIAQPGGNNQNNLALSNIGGTTGWELSLVTTPSNHTSHAPDRKMAGGFDNLLLDSLYEDENARRQLQLQNAGYGHGSGEMAAQNPFEHYNNNQNDPFAMSNNIAAPTNVQMALMAQQQQQQQMMFQQQQQQQQNNNMMMNPYQNQYSQYPQQMQQNMGSYNPFGDPLPVANYHQGSLPPNGNYNLM* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1322 594 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 581 - -
Aev04g1322 594 MobiDBLite consensus disorder prediction 338 371 - -
Aev04g1322 594 MobiDBLite consensus disorder prediction 168 187 - -
Aev04g1322 594 SUPERFAMILY GAT-like domain 185 310 - -
Aev04g1322 594 Gene3D - 6 161 IPR008942 -
Aev04g1322 594 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Aev04g1322 594 MobiDBLite consensus disorder prediction 324 389 - -
Aev04g1322 594 SMART enth_2 30 161 IPR013809 -
Aev04g1322 594 SUPERFAMILY ENTH/VHS domain 31 160 IPR008942 -
Aev04g1322 594 Coils Coil 352 372 - -
Aev04g1322 594 CDD ANTH_N 32 154 - -
Aev04g1322 594 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 581 IPR045192 GO:0048268|GO:0072583
Aev04g1322 594 Pfam ANTH domain 31 310 IPR011417 GO:0005543
Aev04g1322 594 Gene3D ANTH domain 173 324 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1322 Aev-Chr4 8936600 8944719 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1322 K20044 - gmx:100786060 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2630 01 29356806 29362023 Aev04g1322 04 8936600 8944719 PCT