Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1312 ATGTTGTTCCACACGAGGCCAAGCTTCTCTTGTTCTTCTTCCTCTTTCAGCTTCTCACAGAACCACTCACTCCAAACCTTACTCAAACGTGGCTTCACACCAACCCTCAATTCCATAAACCTCTTCTTCACTTCCCTTCTCCGCCACCGCAAGTTCAACCTCATCACCCACCTCATCAAAACCCACTTCACCAATTCCCAAACCCTTATGTGGGACACCCTCATAAGGAGCCACACCGACCCAGAAACTGCACTCACCCTCCTCCAACGTTGCATCCAAAACGCCACCGTTTTGCCCTCGGCATTCACCTTCTCATCCGTAATTCACAGACTGTGCTGTAATGGGAACATGGGGAAAGCTCTTGAGGCGCTGGAATTGATGGCTGATGATAGAGTCAGGTACCCTTTTGATGATTTTGTGTTTAGCTCTGTGATTTCTGGGTTTTGTAGGATTGGGAAGCCTGAACTTGGTTTAGGGTTCTATGAGAATGCGATTGGTTCTGGGTCATTGAGGAGGCCCAATTTGGTCACTTTCACTGCACTTGTGGGTGCACTTTGTAAATTGGGGAGGGTTGATGAGGTTTGTGGTTTGGTTGAGGAAATGGTGAATAATGGTGGGTTTGGTTTGGATGTTGTTTTTTATAGCACTTGGGTCTGTGGGTATGTTGAAAGGAAGGACCTGGTTGAGGTTTTTAGGAAGATGGGGGAGATGGTGGAGAAGGGTATTGCACATGATGATGTTAGTTATACTATACTCATTGATGGGTTTTCGAAGTTGGGTGATGTGGAGAAGTCGTTCGGGTTGTTGGCTAAGATGATAAAGGAAGGGAGGAGACCCAATAAGGTCACTTACACTGCCATCATGTGTGCTTATTGTAAGAAGGGTAAAGTGGAGGAAGCATTTAGTGTTTACGAGAGGATGGTGGAGTTGGGAATTGAGTTGGACGAGTTTGTATTTGCGGTTTTGATTGATGGGTTTGGCAGGATCGGAGATTTCAATGGCGTGTTTAGACTGTTTGATGAAATGGAGAGGAGAGGGGTTAGGCCTAGTGTTGTTACGTATAATACTATTGTAAATGCTTTGTGTAAGTTTGGGAGGACATCTGAGGCAGATGAGTTGTCGAAAGATGTGGTTGCGGATGTGATAACGTACAGCACGTTGTTGCATGGATATGCTGAAGAAGAGAATGTTCCGGGGATTTTGCAGACAAGGAGGAGGCTAGAAGAAGCTGGAATCTCCATGGATGTTGTAATGTGTAATGTGCTGATCAGAGCACTGTTTATGATGGGGGCTTTTGAAGACATTTATGCACTTTACAAAGGAATGCGGGGAATGGGCCTGGTTCCAAATTCTGTTACTTACTGCACAATGATTGATGGGTATTGTAAGGCAGGAAGAATTGATGAGGCGCTTGAGGTATTTGATGACTTCAGGAAGACATCTATCTCTTCACCTGCATGCTATGCTAGTATTATTAATGGCCTTTGCAAAGAGGGCATGGTAGAAATGGCCATTGAGGCATTACTTGAACTCAATCGAAATGGTCTGGAGTTGGATAGATGTACATATAGGATTTTAGTGAGGTCAATTATCACAGAAAAGGGTGCAGAAGTTGTTTTAGATTTAGTTGACAGAATGGAAGGTTTGCGGCCAGACTTATATAATGCGGTATGTAACGATGCAATCTTTTTATTATGCAAAAGAGGTTTGCTTGAGGATGCATATCTATTGTGCATGATGATGAGAAAGAAGGGCTCATCTATCACAAGCAAATCTTATTATTCAATATTAAGAAGGTATCTTAGTAATGGGAATAGAGAGCAAATTCTGCCCCTCTTGAATAGCTTCCTGAAAGAATATGGCTTAGTCAATTCAACGGTGCAAAAGATACTTGCATGCTACCTATGTCTGAATGATGTACATAGTGCCATTCGATTTCTTCGAAAAATAAAGGCTCATTCTTCAGAAGTCACATTACCTGTCTCCATTCTCAAAATTCTTGTAAAGGAGGGTAGAGCTTTAGATGCATATAAGCTTGTCATGGAGACTCAAGATTGTTTAGCAGTCATGTTGTATATTGATTATGCCATTGTAATTGATGGCTTATGCAAGGGAGGATATCTCAATGAAGCATTGGATCTTTGTGCCTTTGCTGAAAAGAAAGGGATAACTTTGGACATAGTCGTATATAATTCAATCATAAATGGATTGTGCCATGAGGGACGCCTTATTGAAGCATTTCGGCTATTTGATTCATTAGAGAAACTTAATTTGATACCCTCTGAAATAACTTATGCTACATTAATTTATGCTCTGTGTAGGGAGGGATACCTGCCAGATGCTGAGCATGTTTTTGGGAAAATGGTCCTCAAGGGCTTTCAACCAAAAACACAAGTTTACAATTCATTACTTGAGGGTTTTTCTAAGTTAGGTCAATTAGAGAAGGCATTTGAGCTTCTAAATGTTATGGATGCAAAATATGTTGAACCAGACGGTTTGACTGTTAGTGCTGTGATAAATTGTCATTGCCAGAAGGGCGACATGGAAGGGGCCCTTCAGTTCTACTATAAGTTCAAGAGGAAAGAGATATCACCTGATTTTTTTGGGTTCTTGTATTTGATAAGAGGTCTGTGTACCAAGGGAAGGATGGAAGAAGCTAGAAATGTCTTGAGAGAAATGCTCCAGTCCAAGAATATTGCGGAGATAATTAACATAGTCAACAATGAGGTCGATACTGAGTCAGTAGGTGATTTTCTTGCCATTTTGTGCGAGCAAGGAAGCATTCAAGAAGCTGTTACGGTTCTCAATGAAATTGCAAGAACCCTTTTTCCTGTTCTGAGGCTGTCGACATATAATCAAGTATCCCATAAACAGCAGAGCATTTATGAATTGGACGATTCTTGTTCAGAATCTTCAGGCCATCTACCTTCCTCTTGCAAAAGTGGTTTGGCTCTTGAATCTTGTGATACCATGGATGTAAGGAATCTTAATATAAATAATGATAGTAATGTGACAAGATCCCAGATGCACAACTTTGACTTCTATTATTCAAGAATCGCTACACTCTGTGCCAAAGGGGAGCTGCAGAAAGCTAATCAACTAGCAAAAGGAATGGTTTCTGATCTGAAAAAGACAATGAAAACTTAA 3147 0.4137 MLFHTRPSFSCSSSSFSFSQNHSLQTLLKRGFTPTLNSINLFFTSLLRHRKFNLITHLIKTHFTNSQTLMWDTLIRSHTDPETALTLLQRCIQNATVLPSAFTFSSVIHRLCCNGNMGKALEALELMADDRVRYPFDDFVFSSVISGFCRIGKPELGLGFYENAIGSGSLRRPNLVTFTALVGALCKLGRVDEVCGLVEEMVNNGGFGLDVVFYSTWVCGYVERKDLVEVFRKMGEMVEKGIAHDDVSYTILIDGFSKLGDVEKSFGLLAKMIKEGRRPNKVTYTAIMCAYCKKGKVEEAFSVYERMVELGIELDEFVFAVLIDGFGRIGDFNGVFRLFDEMERRGVRPSVVTYNTIVNALCKFGRTSEADELSKDVVADVITYSTLLHGYAEEENVPGILQTRRRLEEAGISMDVVMCNVLIRALFMMGAFEDIYALYKGMRGMGLVPNSVTYCTMIDGYCKAGRIDEALEVFDDFRKTSISSPACYASIINGLCKEGMVEMAIEALLELNRNGLELDRCTYRILVRSIITEKGAEVVLDLVDRMEGLRPDLYNAVCNDAIFLLCKRGLLEDAYLLCMMMRKKGSSITSKSYYSILRRYLSNGNREQILPLLNSFLKEYGLVNSTVQKILACYLCLNDVHSAIRFLRKIKAHSSEVTLPVSILKILVKEGRALDAYKLVMETQDCLAVMLYIDYAIVIDGLCKGGYLNEALDLCAFAEKKGITLDIVVYNSIINGLCHEGRLIEAFRLFDSLEKLNLIPSEITYATLIYALCREGYLPDAEHVFGKMVLKGFQPKTQVYNSLLEGFSKLGQLEKAFELLNVMDAKYVEPDGLTVSAVINCHCQKGDMEGALQFYYKFKRKEISPDFFGFLYLIRGLCTKGRMEEARNVLREMLQSKNIAEIINIVNNEVDTESVGDFLAILCEQGSIQEAVTVLNEIARTLFPVLRLSTYNQVSHKQQSIYELDDSCSESSGHLPSSCKSGLALESCDTMDVRNLNINNDSNVTRSQMHNFDFYYSRIATLCAKGELQKANQLAKGMVSDLKKTMKT* 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1312 1048 Gene3D Tetratricopeptide repeat domain 76 232 IPR011990 GO:0005515
Aev04g1312 1048 Gene3D Tetratricopeptide repeat domain 328 445 IPR011990 GO:0005515
Aev04g1312 1048 Gene3D Tetratricopeptide repeat domain 446 535 IPR011990 GO:0005515
Aev04g1312 1048 Gene3D Tetratricopeptide repeat domain 233 326 IPR011990 GO:0005515
Aev04g1312 1048 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 866 900 IPR002885 -
Aev04g1312 1048 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 450 484 IPR002885 -
Aev04g1312 1048 PANTHER FERTILITY RESTORER-LIKE 662 723 - -
Aev04g1312 1048 PANTHER FERTILITY RESTORER-LIKE 44 528 - -
Aev04g1312 1048 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 831 865 IPR002885 -
Aev04g1312 1048 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 761 795 IPR002885 -
Aev04g1312 1048 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 174 208 IPR002885 -
Aev04g1312 1048 Gene3D Tetratricopeptide repeat domain 825 899 IPR011990 GO:0005515
Aev04g1312 1048 Pfam PPR repeat family 795 843 IPR002885 -
Aev04g1312 1048 Pfam PPR repeat family 487 528 IPR002885 -
Aev04g1312 1048 Pfam PPR repeat family 279 326 IPR002885 -
Aev04g1312 1048 Pfam PPR repeat family 210 258 IPR002885 -
Aev04g1312 1048 Pfam PPR repeat family 726 774 IPR002885 -
Aev04g1312 1048 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 280 314 IPR002885 -
Aev04g1312 1048 Pfam PPR repeat 562 585 IPR002885 -
Aev04g1312 1048 Pfam PPR repeat 695 722 IPR002885 -
Aev04g1312 1048 Pfam PPR repeat 140 163 IPR002885 -
Aev04g1312 1048 SUPERFAMILY HCP-like 257 509 - -
Aev04g1312 1048 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 245 279 IPR002885 -
Aev04g1312 1048 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 415 449 IPR002885 -
Aev04g1312 1048 Gene3D Tetratricopeptide repeat domain 536 665 IPR011990 GO:0005515
Aev04g1312 1048 Gene3D Tetratricopeptide repeat domain 666 824 IPR011990 GO:0005515
Aev04g1312 1048 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 315 349 IPR002885 -
Aev04g1312 1048 PANTHER FERTILITY RESTORER-LIKE 719 1044 - -
Aev04g1312 1048 PANTHER FERTILITY RESTORER-LIKE 514 622 - -
Aev04g1312 1048 Pfam PPR repeat 862 893 IPR002885 -
Aev04g1312 1048 Pfam PPR repeat 173 202 IPR002885 -
Aev04g1312 1048 Pfam PPR repeat 345 370 IPR002885 -
Aev04g1312 1048 Pfam PPR repeat 445 476 IPR002885 -
Aev04g1312 1048 Pfam PPR repeat 98 127 IPR002885 -
Aev04g1312 1048 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 350 380 IPR002885 -
Aev04g1312 1048 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 796 830 IPR002885 -
Aev04g1312 1048 Pfam Pentatricopeptide repeat domain 375 425 IPR002885 -
Aev04g1312 1048 SUPERFAMILY TPR-like 731 896 IPR011990 GO:0005515
Aev04g1312 1048 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 726 760 IPR002885 -
Aev04g1312 1048 PANTHER ATPASE EXPRESSION PROTEIN 3 662 723 - -
Aev04g1312 1048 PANTHER ATPASE EXPRESSION PROTEIN 3 44 528 - -
Aev04g1312 1048 PANTHER ATPASE EXPRESSION PROTEIN 3 719 1044 - -
Aev04g1312 1048 PANTHER ATPASE EXPRESSION PROTEIN 3 514 622 - -
Aev04g1312 1048 TIGRFAM PPR: pentatricopeptide repeat domain 102 130 IPR002885 -
Aev04g1312 1048 TIGRFAM PPR: pentatricopeptide repeat domain 318 350 IPR002885 -
Aev04g1312 1048 TIGRFAM PPR: pentatricopeptide repeat domain 834 866 IPR002885 -
Aev04g1312 1048 TIGRFAM PPR: pentatricopeptide repeat domain 799 831 IPR002885 -
Aev04g1312 1048 TIGRFAM PPR: pentatricopeptide repeat domain 763 795 IPR002885 -
Aev04g1312 1048 TIGRFAM PPR: pentatricopeptide repeat domain 728 761 IPR002885 -
Aev04g1312 1048 TIGRFAM PPR: pentatricopeptide repeat domain 873 896 IPR002885 -
Aev04g1312 1048 TIGRFAM PPR: pentatricopeptide repeat domain 487 519 IPR002885 -
Aev04g1312 1048 TIGRFAM PPR: pentatricopeptide repeat domain 452 482 IPR002885 -
Aev04g1312 1048 TIGRFAM PPR: pentatricopeptide repeat domain 417 450 IPR002885 -
Aev04g1312 1048 TIGRFAM PPR: pentatricopeptide repeat domain 282 316 IPR002885 -
Aev04g1312 1048 TIGRFAM PPR: pentatricopeptide repeat domain 247 280 IPR002885 -
Aev04g1312 1048 TIGRFAM PPR: pentatricopeptide repeat domain 352 373 IPR002885 -
Aev04g1312 1048 TIGRFAM PPR: pentatricopeptide repeat domain 176 205 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1312 556 910 Glycosyltransferase AT1G05670 27.348 1.05e-31 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1312 - K17964 gmx:100783405 1469.91