Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1290 ATGTTGGGTGCTGCATTCTCAACAACAACAACAACAATTTCAATGCTTTGTCCGAATCATAAACTATTTTCTACCCATTTTTGTCCCTTTAAGAACACGGTACCAAGTATTATAGGATCTGCTTCAAAGGAGAATTGTTTTGTTAGAGGTCACCAATTCAGCATCAAGCAGTTTTTTGGGATTACATCAAGACGTTCTCCACGTAACAAAGCAGGAGTAGTTGTTTCCCCAAGCTGTGTCCTTCCATTGACAGAAGAGAATGTGGAGAAGGTTTTGGATGAGGTAAGGCCTGGCTTGATGGCTGATGGAGGGAATGTGGCTTTACATGAGATTGATGGCCTTGTTGTTGTCCTCAAGCTTCAAGGAGCGTGCGGGTCGTGTCCTAGCTCAGCTATGACATTGAAGATGGGAATCGAAACTCGCCTACGCGACAAGATTCCAGAAATCATGGCAGTGGAGCAGATCGTGGACACCGAGACTGGCCTCGAGTTAACGGCGGAAAATGTTGAAAGTGTTCTTTCTGAAATTAGACCATACCTTGTTGGCACTGGGGGAGGAACATTAGAGCTTGTTCAGATTGATGATTATGTTGTCAAAGTTCGGCTTAGTGGACCGGCGGCTGGGGTTATGACAGTACGTGTCGCCCTCACGCAGAAATTGAGAGACAAGATACCTTCCATTGCGGCTGTGCAGCTAATAGACTGA 705 0.4553 MLGAAFSTTTTTISMLCPNHKLFSTHFCPFKNTVPSIIGSASKENCFVRGHQFSIKQFFGITSRRSPRNKAGVVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSAMTLKMGIETRLRDKIPEIMAVEQIVDTETGLELTAENVESVLSEIRPYLVGTGGGTLELVQIDDYVVKVRLSGPAAGVMTVRVALTQKLRDKIPSIAAVQLID* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1290 234 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 85 159 IPR034904 -
Aev04g1290 234 Gene3D - 80 162 IPR034904 -
Aev04g1290 234 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 163 233 IPR034904 -
Aev04g1290 234 Gene3D - 163 234 IPR034904 -
Aev04g1290 234 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 9 234 - -
Aev04g1290 234 Pfam NifU-like domain 88 153 IPR001075 GO:0005506|GO:0016226|GO:0051536
Aev04g1290 234 Pfam NifU-like domain 169 231 IPR001075 GO:0005506|GO:0016226|GO:0051536
Aev04g1290 234 PANTHER NIFU-LIKE PROTEIN 3, CHLOROPLASTIC 9 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1290 Aev-Chr4 8510739 8512548 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1290 - - gmx:100806364 347.436