Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1281 ATGGAAGGTACCATATTTCCCAATAGACCAGCTTTCCCAGCACCTCCAAACAGACCAACAAGGCCATTGAAACTGAAGCCAACAACGCTTCTTCCTCCTCTCACCTCTCCACCGCCACCACCACCACCACCTTCATTCCACTTAGATTCTCTTCTCCATCACCTCCAAAACCTCACACTTGTGTCTCCAATTCATGAAGAAAGGACCACCCTTTTCCCTTCTCTCCAGCTAGCCCTTGATTCTTGTGAAAGGGACCGACCCATTTCAGGTTCTGACCCCAGGATTGATCACGACCATTTTTTGGATGCAAAGTTTTGGTTTTTATCATCAAGGGGTAAGTTGCTGCTCAATTCAATTGTTGGGTCACCTTTGAATTGTTTGAATGGTTTGTTGAACTCTTTGGAATCTGAGTTGATTGAAGCTGATTTGCCAAGTTTTTTGAGGGCTTTGGACCTCTCTGGGAATTGGGAGAGAGCACTTTTGTTGTTTGAGTGGTTCTTGTTGCAATTTGGGAGTGAGAATTCGAGGGTTGTTGATAACCAGGTTGTTGAGATTATGGTTAGGATATTGGGAAGAGAATCACAACATTCGGTTGCATCCAAGCTGTTTGATTTAATTCCTGTTGAGGAATACTCGCTTGATGTAAGGGCTTACACCACAATTCTTCATGCTTATGCTCGTTGTGGGAAGTATAAGAGAGCTATTGATATCTTTGAGAAGATGAAGGAGAGTGGTCTTGATCCAACTTTGGTCACTTACAATGTTATGCTTGATGTTTATGGCAAGATGGGTCGTTCATGGGATAAAATATTGGAGCTATTGGATGAAATGAGAGGGAAAGGGCTTGAGTTTGATGAGTTCACATGCAGTACTGTGATCTCTGCTTGTGGGAGAGAGGGCATGCTAGAGGAAGCGAGGAAGTTTTTTACCGAATTGAAATTGAATGGATACAAACCGGGAACTGTTACATATAATTCTCTGCTGCAGGTGTTTGGAAAGGCTGGAGTTTACATAGAGGCCTTGAGCATCTTGAAGGAAATGGAGGATAACAATTGCTCACCCGATTCTGTTACTTATAATGAGCTTGTGGCAGCATACGTAAGAGCCGGGTTCCTTGACGAAGGTGCTGCTGTCATAGATACAATGACCAGCAGAGGAGTAATGCCAAATGCTGTAACTTACACCACTGTGATAAATGCCTATGGTAAGGCAGGAAAAGAGGACAAGGCCTTGATGTTGTTTGGCCAGATGAAGGAGTTGGGCTGTGTTCCGAATGTATGTACATACAATTCTGTTCTTGTGATGCTAGGCAAGAAGTTGAGATCAGAAGATATGATTAAGGTTCTTTGTGACATGAAGTCGAATGGTTGTGCCCCTAATCGTGCTACATGGAACACCATGCTTGCTGTATGTGGGGATAAGGGTAAGCACGATTATGTTAGCCGGGTTTTAAGAGAAATGAAGAACTGCGGATTTGAGCCAGACAAGGACACTTTCAATACCTTAATTAGTGCGTATGGTCGGTGTGGATCTGAAGTTGATGCTGCAAAAATGTATGGGGAAATGATTAAAGCTGGCTTTACTCCGTGTGCAACGACTTATAACGCTCTTCTAAATGCTCTTGCAAGGCGAGGCGATTGGAAAGCAGCAGAATCTGTCATTCAGGACATGGGGAACAAGGGCTTTAAGCCTAATGAAACTTCATACTCACTCTTGCTTCATTGTTATTCTAAGAATGGGAATGTAAAAGGGATAGAGAAGGTTGAGAACGAAATTTACAGCGGTCATGTATTTCCGAGTTGGATGCTCTTGAGAACCCTTGTCATCGCATACTTCAAGTGCAGACAACTTCAAGGAATGGAAAGGGCATTCCAACAACTGCAGAAGAATGGATACAAACCTGATATGGTCATAATTAACTCTATGCTTACTATGTTTGTCCGAAACAAGATGCATGATAAGGCTCATGGAATGCTGCATTTTATTCATAAAAGCGGGCTTCAGCCGAATCTTATTACCTATAACAGCCTAATGGACTTATATGCCCGAGAGGGCGAGTGTTGGAAAGCAGAAGAAGTGCTCAAGGGAATCCAAAGCTATGGTCAGAAGCCAGATGTTGTGTCTTATAACACTGTCATCAAAGGGTTTTGCAGACAAGGGCTCATGCAGGAGGCGATTCGAGTCCACTCCGAGATGACGGCTAATGGAATTCGACCGTGCATATTTACATACAACACTTTTTTGGCAGGCTATGCAGGGCTGGGATTGTTTACTGAAGCAGAAGAGGTAATTAGGTATATGATTGAGCACAATTGTAGGCCAAATGTGCTTAGTTACAAGATTGTAGTTGATGCTTATTGTAAAGCAAGGAAATATAGAGAAGCAGTGGAATTTGTGTCTAAAATTAAGGAGATTGATGACTCTTTTGATGATCAATCTGTGAAAAGGCTAGCTTCTTACATTAGGGAGATTTCTGGATCTTGA 2484 0.4267 MEGTIFPNRPAFPAPPNRPTRPLKLKPTTLLPPLTSPPPPPPPPSFHLDSLLHHLQNLTLVSPIHEERTTLFPSLQLALDSCERDRPISGSDPRIDHDHFLDAKFWFLSSRGKLLLNSIVGSPLNCLNGLLNSLESELIEADLPSFLRALDLSGNWERALLLFEWFLLQFGSENSRVVDNQVVEIMVRILGRESQHSVASKLFDLIPVEEYSLDVRAYTTILHAYARCGKYKRAIDIFEKMKESGLDPTLVTYNVMLDVYGKMGRSWDKILELLDEMRGKGLEFDEFTCSTVISACGREGMLEEARKFFTELKLNGYKPGTVTYNSLLQVFGKAGVYIEALSILKEMEDNNCSPDSVTYNELVAAYVRAGFLDEGAAVIDTMTSRGVMPNAVTYTTVINAYGKAGKEDKALMLFGQMKELGCVPNVCTYNSVLVMLGKKLRSEDMIKVLCDMKSNGCAPNRATWNTMLAVCGDKGKHDYVSRVLREMKNCGFEPDKDTFNTLISAYGRCGSEVDAAKMYGEMIKAGFTPCATTYNALLNALARRGDWKAAESVIQDMGNKGFKPNETSYSLLLHCYSKNGNVKGIEKVENEIYSGHVFPSWMLLRTLVIAYFKCRQLQGMERAFQQLQKNGYKPDMVIINSMLTMFVRNKMHDKAHGMLHFIHKSGLQPNLITYNSLMDLYAREGECWKAEEVLKGIQSYGQKPDVVSYNTVIKGFCRQGLMQEAIRVHSEMTANGIRPCIFTYNTFLAGYAGLGLFTEAEEVIRYMIEHNCRPNVLSYKIVVDAYCKARKYREAVEFVSKIKEIDDSFDDQSVKRLASYIREISGS* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1281 827 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 390 424 IPR002885 -
Aev04g1281 827 Pfam Pentatricopeptide repeat domain 624 681 IPR002885 -
Aev04g1281 827 Pfam Pentatricopeptide repeat domain 378 438 IPR002885 -
Aev04g1281 827 Pfam Pentatricopeptide repeat domain 213 263 IPR002885 -
Aev04g1281 827 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 425 459 IPR002885 -
Aev04g1281 827 PANTHER - 1 823 - -
Aev04g1281 827 Gene3D Tetratricopeptide repeat domain 372 490 IPR011990 GO:0005515
Aev04g1281 827 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 214 248 IPR002885 -
Aev04g1281 827 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 249 284 IPR002885 -
Aev04g1281 827 SUPERFAMILY HCP-like 221 421 - -
Aev04g1281 827 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 320 354 IPR002885 -
Aev04g1281 827 MobiDBLite consensus disorder prediction 31 45 - -
Aev04g1281 827 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 460 494 IPR002885 -
Aev04g1281 827 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 355 389 IPR002885 -
Aev04g1281 827 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 775 805 IPR002885 -
Aev04g1281 827 PANTHER OS03G0856100 PROTEIN 1 823 - -
Aev04g1281 827 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 740 774 IPR002885 -
Aev04g1281 827 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 705 739 IPR002885 -
Aev04g1281 827 Pfam PPR repeat family 529 577 IPR002885 -
Aev04g1281 827 Pfam PPR repeat family 319 366 IPR002885 -
Aev04g1281 827 Pfam PPR repeat family 739 788 IPR002885 -
Aev04g1281 827 Pfam PPR repeat family 459 506 IPR002885 -
Aev04g1281 827 Pfam PPR repeat 287 316 IPR002885 -
Aev04g1281 827 Pfam PPR repeat 701 733 IPR002885 -
Aev04g1281 827 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 285 319 IPR002885 -
Aev04g1281 827 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 495 529 IPR002885 -
Aev04g1281 827 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 670 704 IPR002885 -
Aev04g1281 827 MobiDBLite consensus disorder prediction 1 45 - -
Aev04g1281 827 Gene3D Tetratricopeptide repeat domain 124 264 IPR011990 GO:0005515
Aev04g1281 827 Gene3D Tetratricopeptide repeat domain 265 368 IPR011990 GO:0005515
Aev04g1281 827 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 635 669 IPR002885 -
Aev04g1281 827 Gene3D Tetratricopeptide repeat domain 734 807 IPR011990 GO:0005515
Aev04g1281 827 Gene3D Tetratricopeptide repeat domain 622 733 IPR011990 GO:0005515
Aev04g1281 827 Gene3D Tetratricopeptide repeat domain 491 597 IPR011990 GO:0005515
Aev04g1281 827 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 530 564 IPR002885 -
Aev04g1281 827 TIGRFAM PPR: pentatricopeptide repeat domain 392 426 IPR002885 -
Aev04g1281 827 TIGRFAM PPR: pentatricopeptide repeat domain 533 566 IPR002885 -
Aev04g1281 827 TIGRFAM PPR: pentatricopeptide repeat domain 707 739 IPR002885 -
Aev04g1281 827 TIGRFAM PPR: pentatricopeptide repeat domain 672 706 IPR002885 -
Aev04g1281 827 TIGRFAM PPR: pentatricopeptide repeat domain 427 460 IPR002885 -
Aev04g1281 827 TIGRFAM PPR: pentatricopeptide repeat domain 742 776 IPR002885 -
Aev04g1281 827 TIGRFAM PPR: pentatricopeptide repeat domain 322 356 IPR002885 -
Aev04g1281 827 TIGRFAM PPR: pentatricopeptide repeat domain 217 249 IPR002885 -
Aev04g1281 827 TIGRFAM PPR: pentatricopeptide repeat domain 287 320 IPR002885 -
Aev04g1281 827 TIGRFAM PPR: pentatricopeptide repeat domain 251 285 IPR002885 -
Aev04g1281 827 TIGRFAM PPR: pentatricopeptide repeat domain 357 391 IPR002885 -
Aev04g1281 827 TIGRFAM PPR: pentatricopeptide repeat domain 638 670 IPR002885 -
Aev04g1281 827 TIGRFAM PPR: pentatricopeptide repeat domain 463 495 IPR002885 -
Aev04g1281 827 TIGRFAM PPR: pentatricopeptide repeat domain 498 529 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1281 Aev-Chr4 8401988 8404471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1281 617 806 Glycosyltransferase AT1G05670 24.479 3.18e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1281 K17710 - gmx:100803889 1217.22