Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1264 ATGATACTCTTGATGATGCAGATGGCGGCCTCTTTGGCTTGTCTTGTTGGGAGTAGTTTATCTACTCAGAGTGGTATAAAAATTCTTGGCAAGGACTTCAATGGAAGATATCTCTTCTCTCCTCGTAGACCTTCATCTCTGAATAAGGAACCGAGAGTAGTATCTGTTAATGCATCCTTGGATCAAAGGAAGCATGAAGGCAGGCGGGGATTTCTGAAATTATTGAATGTCGGAGTTGGATTTCCTGCATTATTGGGAAGTGGGAAAGCTTATGCCGATGAAGAAGGGGTTTCCTCCTCCAGAATGTCTTATTCCATGTTTCTTGAATACCTGGACAAAGATAGAGTTAAAAAAGTGGATTTGTATGAGAACGGAACCATAGCTGTTGTAGAGGCTGTTTCTCCTGAGTTGGGTAATAGGGTGCAGCGAGTACGAGTTCAACTACCGGGACTTAGCCAGGAGCTCCTACAGAAATTCAGGGAAAAGAATATTGACTTTGCAGCTCATAATGCCCAAGAAGAGTCGGGTTCTCTATTAGTTAACTTGATTGGGAATCTGGCTTTCCCTCTAATCTTAATTGGAGGATTGTTCCTTCTTTCAAGACGGTCATCTGGAGGGATGGGAGGCCCTGGTGGGTCTGGATTTCCTCTTGCTTTTGGTCAATCTAAAGCTAAGTTCCAAATGGAGCCGAGTACCGGAGTGACATTTGATGATGTTGCTGGGGTGGATGAGGCCAAGCAGGATTTTGTGGAGGTCGTTGAGTTTCTGAAGAAGCCTGAGAGGTTCACTGCTGTTGGGGCACGTATACCAAAAGGAGTTCTTCTTGTTGGTCCTCCAGGAACTGGAAAGACATTATTAGCCAAAGCTATTGCAGGTGAAGCAGGTGTTCCATTTTTCTCAATCTCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTTGGTGCTTCTCGGGTCCGCGATTTATTTAAGAAGGCCAAAGAGAATGCTCCTTGCATTGTTTTTGTTGATGAAATTGATGCTGTTGGAAGGCAAAGAGGTACTGGAATTGGTGGAGGGAATGATGAAAGAGAGCAGACCCTCAACCAACTTTTGACAGAAATGGATGGGTTTGAGGGTAACACCGGTATCATTGTCATTGCAGCAACTAACAGGGCTGACATTCTTGACTCTGCTTTATTGAGACCCGGTCGTTTTGATAGACAGGTAATGGTTGATGTTCCAGATATTCGGGGAAGGACTGAAATCCTCAAGGTTCATGGTAGCAATAAAAAGTTTGAGGGTGATGTTTCTCTTGAGGTAATTGCAATGAGAACACCTGGATTTAGTGGAGCAGATCTTGCGAATCTCTTGAATGAAGCTGCAATATTAGCTGGTCGGCGTGGAAAGACGGCAATTTCATCCAAAGAGATTGACGATTCTATTGATAGGATTGTGGCTGGAATGGAAGGAACTGTGATGACAGATGGGAAAAGCAAAAGTTTGGTGGCATATCATGAAGTTGGTCATGCCATTTGTGGAACTTTGACTCCCGGTCACGATCCTGTCCAAAAGGTAACCCTAGTTCCTCGTGGGCAAGCTCGGGGTCTGACTTGGTTCATTCCTTCCGATGACCCAACTCTGATATCCAAACAACAACTCTTTGCAAGAATTGTCGGTGGACTAGGTGGTAGAGCTGCAGAGGAAGTCATTTTTGGTGATGCTGAGGTTACAACTGGAGCAGTTGGTGATTTGCAGCAAATAACTGGTTTGGCCAAACAGATGGTAACCACATTTGGAATGTCTGACATTGGTCCGTGGTCACTTATGGATGCTTCGGCTCAAAGTGCAGATATCATCATGAGAATGATGGCAAGAAACTCAATGTCAGAAAAGCTAGCCGAAGACATCGATGCTGCTATCAAGAGGATCTCAGACGAAGCATATGAAATTGCGTTGGGCCATATTAGGAACAACCGTGACGCAATCGATAGGATTGTGGAAGTCCTACTGGAGAAGGAGTCAATGACCGGAGATGAATTCCGTGCTCTTCTGTCGGAATTTGTTGAAATTCCAGCTGAAAATATGGTCCCTCCTTCAACTCCTTCACCGATAGCTGTTTGA 2100 0.4457 MILLMMQMAASLACLVGSSLSTQSGIKILGKDFNGRYLFSPRRPSSLNKEPRVVSVNASLDQRKHEGRRGFLKLLNVGVGFPALLGSGKAYADEEGVSSSRMSYSMFLEYLDKDRVKKVDLYENGTIAVVEAVSPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEESGSLLVNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGSGFPLAFGQSKAKFQMEPSTGVTFDDVAGVDEAKQDFVEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVMVDVPDIRGRTEILKVHGSNKKFEGDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGDAEVTTGAVGDLQQITGLAKQMVTTFGMSDIGPWSLMDASAQSADIIMRMMARNSMSEKLAEDIDAAIKRISDEAYEIALGHIRNNRDAIDRIVEVLLEKESMTGDEFRALLSEFVEIPAENMVPPSTPSPIAV* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1264 699 ProSitePatterns AAA-protein family signature. 376 394 IPR003960 GO:0005524|GO:0016887
Aev04g1264 699 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 2, CHLOROPLASTIC 10 689 - -
Aev04g1264 699 Gene3D - 224 406 IPR027417 -
Aev04g1264 699 Gene3D - 97 176 - -
Aev04g1264 699 SMART AAA_5 269 408 IPR003593 -
Aev04g1264 699 Pfam ATPase family associated with various cellular activities (AAA) 273 404 IPR003959 GO:0005524|GO:0016887
Aev04g1264 699 CDD AAA 264 405 - -
Aev04g1264 699 Pfam AAA+ lid domain 428 471 IPR041569 -
Aev04g1264 699 SUPERFAMILY FtsH protease domain-like 488 686 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aev04g1264 699 Gene3D - 407 485 - -
Aev04g1264 699 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 181 677 IPR005936 GO:0004176|GO:0004222|GO:0016020
Aev04g1264 699 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 233 476 IPR027417 -
Aev04g1264 699 PANTHER METALLOPROTEASE M41 FTSH 10 689 - -
Aev04g1264 699 Gene3D Peptidase M41 486 682 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aev04g1264 699 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 1 692 IPR005936 GO:0004176|GO:0004222|GO:0016020
Aev04g1264 699 Pfam Peptidase family M41 487 675 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1264 Aev-Chr4 8247517 8250143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1264 227 677 Miscellaneous Gene Families AT5G53170 50.220 1.11e-136 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1264 K03798 - mnt:21404222 1162.13