Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1250 ATGGTATATGCCATGCGCTATATTGGTATTGCAGTTACTGTTGGCTCTGCTTTTGACTCTCTCTACTGTTCCACCCTTCAACAATCAACGCTTCTTTCATTCTTCACCGTTTCTTCACGCAGAGACAGAGCACACAGCCCAGAGAGAAACAGAGAGAGAGAGAGATTTTGTGTGTGTTTTCGTGCCATGGAAGAAGTTGAGAAGGATAAACCTGTTCGTGTATATGCTGATGGCATTTATGATCTCTTTCACTTCGGCCATGCCCGTTCTCTTGAGCAGGCTAAGAAACTGTTTCCAAACACATATCTCCTTGTTGGATGCTGCAATGATGAGACCACCCACAAGTATAAGGGAAAAACTGTCATGACTGACCAGGAACGCTATGAGTCTCTTCGCCACTGCAGGTGGGTTGACGAAGTTATTCCAGATGCACCATGGGTAATCTCACAGGAGTTCCTTGACAAGCATCAGATTGACTATGTAGCTCACGATTCTCTTCCTTATGCTGATGCAAGTGGAGCTGGAAAGGATGTCTATGAATTTGTTAAGTCTGCTGGAAAATTTAAGGAAACAAAGCGAACTGACGGAATTTCTACTTCAGATATCATAATGAGAATTATCAAAGATTATAATCAGTATGTAATGCGTAACTTAGACCGCGGATATACTAGAAAGGATCTAGGTGTCAGCTATGTCAAGGAGAAGAGGTTGAGAATGAACATGGGACTTAAAAAGTTGCGCGAAAGAGTTAAGAAACAGCAAGAGAATGTGGGAAAGAAGATACAAATAGTAGCAAAAACGGCGGGAATGCACCGAAATGAATGGATCGAAAATGCTGATCGATTAGTCGCGGGATTTCTCGAGATGTTTGAAGAAGGATGCCACAAAATGGGAACAGCAATCAGAGACAGAATTCAAGAACGACTTAGGGCACAGCAGATTAAATCTCTTCTTTATGATGAGTGGGAAGATGATGATGATGATGATGAATTTTATGAAGATGATGAATCTGTAGAATACTACAGTGACTAA 1032 0.4157 MVYAMRYIGIAVTVGSAFDSLYCSTLQQSTLLSFFTVSSRRDRAHSPERNRERERFCVCFRAMEEVEKDKPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDETTHKYKGKTVMTDQERYESLRHCRWVDEVIPDAPWVISQEFLDKHQIDYVAHDSLPYADASGAGKDVYEFVKSAGKFKETKRTDGISTSDIIMRIIKDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRMNMGLKKLRERVKKQQENVGKKIQIVAKTAGMHRNEWIENADRLVAGFLEMFEEGCHKMGTAIRDRIQERLRAQQIKSLLYDEWEDDDDDDEFYEDDESVEYYSD* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1250 343 Pfam Cytidylyltransferase-like 75 204 IPR004821 GO:0003824|GO:0009058
Aev04g1250 343 CDD CCT 70 221 IPR041723 -
Aev04g1250 343 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 73 140 IPR004821 GO:0003824|GO:0009058
Aev04g1250 343 PANTHER CYTIDYLYLTRANSFERASE 62 342 IPR045049 GO:0004105|GO:0006657
Aev04g1250 343 PANTHER CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2-LIKE ISOFORM X1 62 342 - -
Aev04g1250 343 Gene3D HUPs 40 292 IPR014729 -
Aev04g1250 343 SUPERFAMILY Nucleotidylyl transferase 73 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1250 Aev-Chr4 8109356 8113397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1250 98 334 Acyl Lipid Metabolism Gene Families AT2G32260 78.992 1.93e-136 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1250 K00968 - gmx:100786249 483.796