Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1248 ATGTCCAAATCATCATCTTCATCTCAATCCTCACCAACAAAGAAAGAAAGAGTGTTGTACCCAGAGGATTATGGGGCAGATCCAAGTGGGGAAGAAGATAGCAGTGAAGCAATAATGAAGGCAGTGAGAGAAGCATATGAGATGGATGAGGGTGGCCTTGAGCTGCTTCCAGGCATAAGAGACCTTGGTGGTGTTGTGATTGATCTTCATGGTGGAAACTACAAAATCTCCGAACCTATCACTTTTCCTTCTGCTGCTGGCAACATTCTCGTAAAAGGAGGAACATTGAGAGCTTCTGATACATTTCCCACAGATCGGCACTTAGTTGAATTATGGTCATCAAATTCCCCAAAACTCCAAAAAACAGAACCATCCCGTTATGAATTCAACAACAGCAGCAAATTCCAGCAACCAATTGGAATTTACTATGAAGACATAACATTCAGGGACATTCTCTTTGATTCCGGCTACCGCGGCGGCGGCCTATTCGTCGCCGATTCGGCCAGGATCAGGATCAACAACTGCTTCTTCCTCCACTTCACCACAGAGGGAATTCTAGTCCAAGGAGGCCACGAGACATTCGTCTCGAATAGCTTTCTTGGGCAGCACTCAACCGTAGGCGGCGACAAAGGCGAGAGGGAATTCTCCGGGACCGCAATTGACCTCGCCAGCAACGACAATGCAGTCACGGACGTCGCAATTTTCTCGGCCGCCATCGGCATTGTACTCAGGGGACAAGCTAATATCATAACAGGGGTGCATTGTTACAACAAGGCCACAGGGTTTGGTGGAATTGGAATTTTGGTGAAGCTAGCAGGAAATTCCAAAACCAGAATTGATAATTGTTATATGGATTACACATCAATTGTTATGGAAGATCCTTTTCAGGTTCATGTCACAAATGGATTTTTCTTAGGAGATGCTAATATTGTTTTGAAATCAATTAAGGGACAAATTTCAGGGTTGAACATAGTAGACAACATGTTCAGTGGTAACATTAAAAATAAGGTACCAATTGTGAGTTTAGATGGAGAATTCAGTGAAATTGATCAAGTTGTGGCTGATAGGAATAGTGTTGATGGGATGGTGCTAAGATCAACGGTTGGGAAATTAAGTGTTGGTGGTGATAACACAATTAGGAGGAGTTGGGTGGGTGATTTTAGTAATGTTTTGTTGTTTCCTGATAGGATTAGATTCTTTCAGTATTCATTTTATTCACTAGGAGACCTTAAATTTGTGGCAAATTCTGTGAGAAATGTGTCCAATAATGTTGTGGTTGTGGAGAGTGATCAACCTGTAGATGGGGTTGTTTCATTCTTTGTTGAACAATGA 1332 0.4257 MSKSSSSSQSSPTKKERVLYPEDYGADPSGEEDSSEAIMKAVREAYEMDEGGLELLPGIRDLGGVVIDLHGGNYKISEPITFPSAAGNILVKGGTLRASDTFPTDRHLVELWSSNSPKLQKTEPSRYEFNNSSKFQQPIGIYYEDITFRDILFDSGYRGGGLFVADSARIRINNCFFLHFTTEGILVQGGHETFVSNSFLGQHSTVGGDKGEREFSGTAIDLASNDNAVTDVAIFSAAIGIVLRGQANIITGVHCYNKATGFGGIGILVKLAGNSKTRIDNCYMDYTSIVMEDPFQVHVTNGFFLGDANIVLKSIKGQISGLNIVDNMFSGNIKNKVPIVSLDGEFSEIDQVVADRNSVDGMVLRSTVGKLSVGGDNTIRRSWVGDFSNVLLFPDRIRFFQYSFYSLGDLKFVANSVRNVSNNVVVVESDQPVDGVVSFFVEQ* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1248 443 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 5 443 - -
Aev04g1248 443 MobiDBLite consensus disorder prediction 1 35 - -
Aev04g1248 443 MobiDBLite consensus disorder prediction 1 15 - -
Aev04g1248 443 Gene3D - 22 432 IPR012334 -
Aev04g1248 443 SUPERFAMILY Pectin lyase-like 27 384 IPR011050 -
Aev04g1248 443 PANTHER POLYGALACTURONASE QRT3 5 443 IPR039279 GO:0004650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1248 Aev-Chr4 8097079 8102211 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1248 - - gmx:100802482 637.106