Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1241 ATGAGTTCCATCACTGCCTTAAACAAATGCTTTAAGCCTCATCTTCATCATCACCACCATCACCACCACCACCATCATCATCATCATCATAATCCAACTTTCACTTTCACTTTCCTTCATTCTTGCTTCTTCTTCTTGTTTCTCACCTTAGCTCCTTCATGCGCTTCAACGTTCTCTGGGAATGAAACTGGAGATTTAGAAAAAAGAGGTGATTTGTTTCCGCAGATTCTAAGAGACGAGGCAGTGGGGAGACTCTATGATCTTGCAAAGGTGAGTGATGGTAGTGGCTATTTGGAGAGGACATTTTTGAGTCCTGCATCCATGAGGGCAATTAATATCATTCGCGAATGGATGGAGGATGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAATGTACACGGTCGAGTTGAGGGTGAAAATCCAGATGCTAAGGCTTTATTGATCGGATCTCACATGGACACTGTTGTTGATGGTGGAAAGTTTGATGGATCACTTGGAATAGTTTGTGCAATATCAGCATTAAAGGCTATGCATGTCAATGGAAAGCTGCAAAAGCTAAAGCGCCCCGTCGAGGTGATTGCATTTAGTGATGAAGAGGGTGTAAGGTTTCAAACTACTTTCTTGGGCAGTGGTGCTATATCTGGTATTTTGCCTGTCACGACGTTGGAGATATCGGATAAGAGGGATGTAATGATAAAAGATGTTCTTAAGGAGAACTCGATCGATATTACGGAGGAAAGCTTGTTACAGCTCAAGTATGACCCGAAATCGATTTGGGGCTATGTCGAGGTTCACATTGAGCAGGGTCCTGTGCTAGAACAAGTTGGTTTCCCACTTGGTGTAGTTAAAGGCATAGCTGGACAGACACGATTGAAGGTTACAGTAAGAGGATCACAAGGTCATGCAGGAACCGTTCCGATGTCCATGCGCCAGGATCCTATGGCTGCGGCTGCAGAATTAATGGTAGTTATGGAAAGCCTCTGTAAACATCCTCAAGAATTCCTTTCTTATGATGGTCATTGCAGCGATTCCTCGGTGAAATCACTTTCAACTTCGCTCGTTTGTACTGTTGGAGAGATTTCAACATGGCCAAGTGCCAGTAATGTTATCCCAGGCCAGGTTACATATACTGTGGACATTCGAGCGATCGATGACCTTGGACGTGAGGCTGTTATCTATGATTTATCGAAAAGAATTTATCAAATATGTGATAAGCGTTCTGTTTCCTGCATTATTGAGCACAAGCATGATGCAGGTGCTGTGATCTGTGATTCTGACCTGAGTTCGCAGCTCAAGTCCGCGGCTTATTCGGCGCTCAAGAGGATGGAGGGTGACATCCAGGATGAAGTGCCAACACTAATGAGTGGAGCAGGACATGATGCAATGGCAATGTCTCACTTAACAAAGGTTGGAATGCTGTTTGTTCGGTGTCGCGGAGGAATAAGTCACTCGCCACAAGAGCATGTTCTAGATAATGATGTTTGGGCTGCTGGTTTAGCAACCATGTCATTTCTGGAGAATCTATCATAG 1533 0.4436 MSSITALNKCFKPHLHHHHHHHHHHHHHHHNPTFTFTFLHSCFFFLFLTLAPSCASTFSGNETGDLEKRGDLFPQILRDEAVGRLYDLAKVSDGSGYLERTFLSPASMRAINIIREWMEDAGLRTWVDQMGNVHGRVEGENPDAKALLIGSHMDTVVDGGKFDGSLGIVCAISALKAMHVNGKLQKLKRPVEVIAFSDEEGVRFQTTFLGSGAISGILPVTTLEISDKRDVMIKDVLKENSIDITEESLLQLKYDPKSIWGYVEVHIEQGPVLEQVGFPLGVVKGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMAAAAELMVVMESLCKHPQEFLSYDGHCSDSSVKSLSTSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKRIYQICDKRSVSCIIEHKHDAGAVICDSDLSSQLKSAAYSALKRMEGDIQDEVPTLMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPQEHVLDNDVWAAGLATMSFLENLS* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1241 510 Gene3D - 288 420 - -
Aev04g1241 510 SUPERFAMILY Bacterial exopeptidase dimerisation domain 288 420 IPR036264 -
Aev04g1241 510 SUPERFAMILY Zn-dependent exopeptidases 73 509 - -
Aev04g1241 510 TIGRFAM hydantase: amidase, hydantoinase/carbamoylase family 93 333 IPR010158 GO:0016813
Aev04g1241 510 Pfam Peptidase dimerisation domain 288 400 IPR011650 -
Aev04g1241 510 Gene3D Zn peptidases 94 497 - -
Aev04g1241 510 CDD M20_bAS 84 498 - -
Aev04g1241 510 PANTHER ALLANTOATE DEIMINASE-RELATED 70 503 - -
Aev04g1241 510 Pfam Peptidase family M20/M25/M40 148 498 IPR002933 GO:0016787
Aev04g1241 510 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 147 156 IPR001261 -
Aev04g1241 510 PANTHER ALLANTOATE DEIMINASE-RELATED 70 503 IPR010158 GO:0016813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1241 Aev-Chr4 8038464 8042968 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1241 K02083 - gmx:100819399 848.195