Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1239 ATGGCTTCCATGAGAGGAGTCACAGATGACCAGGGTGTACCACAGAGAAGCTATTGGAGATGGAGAAAAGAAGATTTCTTGCCAGAGAAGTCATTCCAGAGCTGGAACAACTACTTCTCTGCCATGTCACAAACATGGTTATGGTTCAAGGACCGGCTCACGAGCAGATCAGATGATGCTACTGAGACAGAGATACTCAGGAAGCAAAGTGAGAATGACATGAAAAGGTGCCTAAACTGGTGGGATCTAATCTGGTTTGGTTTTGGAGCAGTTGTTGGGGGTGGAGTCTTTGTCCTAACTGGTCAAGAAGCTCATGACAATGCTGGTCCTGCTATAGTTTTGTCATATATTGCCTCAGGAATCTCAGCAATGCTCTCAGTTTTCTGCCTCACAGAATTTGCTGTTGAAGTACCTGTTGCTGGTGGATCATTTGCTTATCTAAGGATTGAGTTAGGTGATTTTGCTGCTTTTATAGCTGCAGGGAACATTCTCCTTGAGAGTATTGTTGGAAGTGCTGTAGTTGCAAGGTCATGGACTTCTTACTTCACTACCCTTTTGAACAAACCAAGGAATTCACTTAGGATCAAAACTGGTCTTAAAGAAGGTTACAATTTGCTAGACCCTATTGCTGTTTTGGTGTTGGCAATTACTTCAGCATTTACAATTAACAGTACAAGGAAGACTTCCTATCTCAATCGGATAGCATCAACAGTCCACGCTATAGTGATTCTGTTCGTGATCGTTGCAGGGCTTTTCGTCGCCGACACATCAAATCTTACACCTTTTCTGCCTTTTGGGGCTAAAGGGGTGTTTCAGGCTGCAGCAATTGTGTATTTTGCATATATGGGTTTTGACAGTATTTCAACCATGGCTGAAGAGACCAAGAACCCATCAAGTGACATACCAATAGGGTTGATTGGGTCAATGTCAATGATCACAGTGATATATTGCCTAATGGCACTATCACTTAGCATGGTGCAGAAGTACACAGATATAGACCCTGAAGCAGCTTTCTCTGTTGCATTTCAAGGTGCTGGAATGAATTGGGCCAAGTATGTGCTAGCTTTTGGTGCACTGAAGGGTATGACCACAGTGCTTCTTGTATGGGCATTAGGACAAGCAAGGAAACCTATAAATGCAACACTCTTGATAACAATCACAAGTTCTTGCATAGCTTTCTTCACAGGCCTTGATGTATTATCAGGCTTGTTTTCAGTAAGCACACTCTTCATCTTCATGATGATGGCTGTGGCACTTTTGGTAAGGAGGTACTATGTGAGAGGTGTAACACCAAGAGAGAACATTTTGAAGCTTGTTCTGTTCTTGCTACTCATTATTGGTTCTTCTATGGGGATTTCAGCTTATTGGGGGCTTAGGCCTAATGGTTGGATTGGATATAGTGTTACTGTTCCTTTGTGGTTCTTGGCAACATTAGGCATGTCACTGTTTTTGACTCAGCAAAGGGTGCCAAGAGTTTGGGGTGTTCCACTTGTTCCATGGTTGCCATCTTTGTCAATTGCAATAAATATCTTCCTTATGGGGTCTCTAGAACCAGAGGCCTTCATAAGATTTGGAGTCTGCACAGGTGTAATGCTGATCTATTATTTTTTGTTTAGTCTCCATGCAACTTATGATATTGCTCATCAGTGA 1650 0.4248 MASMRGVTDDQGVPQRSYWRWRKEDFLPEKSFQSWNNYFSAMSQTWLWFKDRLTSRSDDATETEILRKQSENDMKRCLNWWDLIWFGFGAVVGGGVFVLTGQEAHDNAGPAIVLSYIASGISAMLSVFCLTEFAVEVPVAGGSFAYLRIELGDFAAFIAAGNILLESIVGSAVVARSWTSYFTTLLNKPRNSLRIKTGLKEGYNLLDPIAVLVLAITSAFTINSTRKTSYLNRIASTVHAIVILFVIVAGLFVADTSNLTPFLPFGAKGVFQAAAIVYFAYMGFDSISTMAEETKNPSSDIPIGLIGSMSMITVIYCLMALSLSMVQKYTDIDPEAAFSVAFQGAGMNWAKYVLAFGALKGMTTVLLVWALGQARKPINATLLITITSSCIAFFTGLDVLSGLFSVSTLFIFMMMAVALLVRRYYVRGVTPRENILKLVLFLLLIIGSSMGISAYWGLRPNGWIGYSVTVPLWFLATLGMSLFLTQQRVPRVWGVPLVPWLPSLSIAINIFLMGSLEPEAFIRFGVCTGVMLIYYFLFSLHATYDIAHQ* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1239 549 Pfam C-terminus of AA_permease 493 542 IPR029485 -
Aev04g1239 549 Pfam Amino acid permease 78 375 IPR002293 GO:0016020|GO:0022857|GO:0055085
Aev04g1239 549 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 14 549 - -
Aev04g1239 549 Gene3D Amino acid/polyamine transporter I 72 480 - -
Aev04g1239 549 PANTHER CATIONIC AMINO ACID TRANSPORTER 5 14 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1239 Aev-Chr4 8026887 8028604 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1239 15 549 Organic Solute Cotransporters AT2G34960 69.052 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1239 - - gmx:100802519 861.292