Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1236 ATGCCAAAGTGTTCAAAAGCTTCTCATACAAAGCTTCTCACAAAATCACTTCGACCATTTCTCAAACTGGGTTTCCCTTCAATCCAAACACTTCCCTATTCCTCCTACTCTTCCTCTCCCAAACCCCATATTCCCGATACCACCCATGAACCTCAACCTCAACAACTCCCTCCAGTTTCAGTTGAAATCTTCAAATCAGGTTCCAAAAAGGGTTCTCACAAATGGGGTTCTTACAATTTGGGTGATTTGACTTTCTATTCCCTCATTGAGACCCATGCCTCTTCCTTCGATTTTGTGTCCTTGGAGAAGGTCCTTCATCAAATGAAGCGTGAAAGGAGGGTTTTCATTGAAAAGAATTTCATTGTTATGTTCAAGGCTTATGGGAAAGCCCATTTACCTGAAAAAGCTGTGGACTTGTTTCATAGAATGGGTGATGAGTTTCAGTGTAGGCAAACTGTGAAATCTTTGAACTCAGTTCTTAATGTCATTATTCAGGAGGGTCTGTTCAACCGTGCATTGGAGTTCTATTCCCATGTTGCTGAATCTAAGAGTTTGAATATACAACCTAATACACTCACTTTTAACTTGATTATTAAGGCTTTATGTAAGCTTGGTTTGGTTGATAAGGCTGTTGAGACTTTCAGGGAAATGCCAATTAGGGGTTGTGCTCCTGATAATTATACATACTCTACACTGATGGATGGGTTGTGTGCTGAGGGTAGGATCGATGAGGCGGTTTCCTTGCTGGATGAGATGCAGATTGAAGGTACATTCCCCAACCCTGTTGTGTTTAATGTGTTGATCAATGCATTGTGTAAGAAAGGTGATTTAGGGCGTGCTTCCAAGCTTGTTGATAATATGTTTCTTAAAGGTTGCCTCCCGAATGAGGTGACGTATAATGCCCTTGTTCATGGCTTGTGTCTCAAGGGTAAGTTGAACAAGGCAGTTAGCCTCTTGAATCAAATGGTGTCGAATAAATGCGTGCCTAATGATATCACGTATGGAACGCTCATTAATGGATTTGTTAAGCAAGGGAGAGCAATTGATGGGGCTCAGGTGTTGTTATCTTTGGAAGAGAGAGGTCATCGTGGGAATGAGCATATATACTCATCCCTCATTAGTGGCTTGTTCAAGGAGGAAAAATCTGAATATGCGATGCGGTTGTGGAAGGAAATGGTTGAGAAAGGATTTTCACCAAATACTATAGTGTATAGTGCTCTTGTAGATGGACTTTGTCGAGTAGGAAAGCCAGATGAAGCAAGGGAATACCTATTTGAGATGAAAAATAAAGGTTGCCTACCGAATTCTTTCACATATAGCTCTCTAATGAATGGATTTTTTAACGCAGGCAATAGCAATAAAGCCATTCTTGTTTGGAAAGAGATGACTAGTAATAATTGTAATCATAATGAGGTTTGTTACAGTATACTCATTAACGGTTTGTGCAAGGATGGGAAGCTTACAGAGGCCTTAATGGTGTGGAAGCAAATGCTGAGTAGAGGAATCAAGTTAGATGTTGTGGCTTACAGTTCTATGATTCATGGCTTTTGTAATGCTCACTTAGTAGAACAGGGCTTGAAACTTTTTCACCAGATGCTTTGTCAGCCTGAAATACAACCAGATGTGGTTACATACAACATACTTTTCCATGCTTTATGCGCGCAGAATAATATATCCCGTGCTATTGATGTTCTGAATATTATGCTAGATCAAGGTTGTGACCCCGATTTTATCACTTGCGATATTTTCTTGAGAGCTTTAAGAGAAAGAGTGAACCCACCTCAAGATGGGAGGGAGTTTCTGGATGAGCTTGTAGTCCGGCTAATTAAGAGACAGAAAACAATAGGTGCTTGTAAAATTATGGAAGTGATGCTACATAAATTTTTGCCTCCAAAAGGTTCTACTTGGGCCATTGTTGTTCAACAGCTCTGCCGACCTAAAAAGGTTCGAGAAACCATTAGTGAATGCCGGAGCAAGCTGTGTAACTGA 1989 0.4052 MPKCSKASHTKLLTKSLRPFLKLGFPSIQTLPYSSYSSSPKPHIPDTTHEPQPQQLPPVSVEIFKSGSKKGSHKWGSYNLGDLTFYSLIETHASSFDFVSLEKVLHQMKRERRVFIEKNFIVMFKAYGKAHLPEKAVDLFHRMGDEFQCRQTVKSLNSVLNVIIQEGLFNRALEFYSHVAESKSLNIQPNTLTFNLIIKALCKLGLVDKAVETFREMPIRGCAPDNYTYSTLMDGLCAEGRIDEAVSLLDEMQIEGTFPNPVVFNVLINALCKKGDLGRASKLVDNMFLKGCLPNEVTYNALVHGLCLKGKLNKAVSLLNQMVSNKCVPNDITYGTLINGFVKQGRAIDGAQVLLSLEERGHRGNEHIYSSLISGLFKEEKSEYAMRLWKEMVEKGFSPNTIVYSALVDGLCRVGKPDEAREYLFEMKNKGCLPNSFTYSSLMNGFFNAGNSNKAILVWKEMTSNNCNHNEVCYSILINGLCKDGKLTEALMVWKQMLSRGIKLDVVAYSSMIHGFCNAHLVEQGLKLFHQMLCQPEIQPDVVTYNILFHALCAQNNISRAIDVLNIMLDQGCDPDFITCDIFLRALRERVNPPQDGREFLDELVVRLIKRQKTIGACKIMEVMLHKFLPPKGSTWAIVVQQLCRPKKVRETISECRSKLCN* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1236 662 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 190 224 IPR002885 -
Aev04g1236 662 Gene3D Tetratricopeptide repeat domain 489 615 IPR011990 GO:0005515
Aev04g1236 662 SUPERFAMILY HCP-like 301 504 - -
Aev04g1236 662 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 225 259 IPR002885 -
Aev04g1236 662 MobiDBLite consensus disorder prediction 34 57 - -
Aev04g1236 662 Pfam PPR repeat 256 287 IPR002885 -
Aev04g1236 662 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 68 660 - -
Aev04g1236 662 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 295 329 IPR002885 -
Aev04g1236 662 TIGRFAM PPR: pentatricopeptide repeat domain 368 401 IPR002885 -
Aev04g1236 662 TIGRFAM PPR: pentatricopeptide repeat domain 472 506 IPR002885 -
Aev04g1236 662 TIGRFAM PPR: pentatricopeptide repeat domain 262 296 IPR002885 -
Aev04g1236 662 TIGRFAM PPR: pentatricopeptide repeat domain 193 225 IPR002885 -
Aev04g1236 662 TIGRFAM PPR: pentatricopeptide repeat domain 437 470 IPR002885 -
Aev04g1236 662 TIGRFAM PPR: pentatricopeptide repeat domain 332 365 IPR002885 -
Aev04g1236 662 TIGRFAM PPR: pentatricopeptide repeat domain 402 435 IPR002885 -
Aev04g1236 662 TIGRFAM PPR: pentatricopeptide repeat domain 227 260 IPR002885 -
Aev04g1236 662 TIGRFAM PPR: pentatricopeptide repeat domain 297 330 IPR002885 -
Aev04g1236 662 TIGRFAM PPR: pentatricopeptide repeat domain 507 541 IPR002885 -
Aev04g1236 662 TIGRFAM PPR: pentatricopeptide repeat domain 543 576 IPR002885 -
Aev04g1236 662 Pfam PPR repeat 122 144 IPR002885 -
Aev04g1236 662 Pfam PPR repeat 368 397 IPR002885 -
Aev04g1236 662 Pfam PPR repeat family 470 518 IPR002885 -
Aev04g1236 662 Pfam PPR repeat family 540 587 IPR002885 -
Aev04g1236 662 Pfam PPR repeat family 189 237 IPR002885 -
Aev04g1236 662 Pfam PPR repeat family 399 447 IPR002885 -
Aev04g1236 662 Pfam PPR repeat family 294 343 IPR002885 -
Aev04g1236 662 Gene3D Tetratricopeptide repeat domain 240 350 IPR011990 GO:0005515
Aev04g1236 662 Gene3D Tetratricopeptide repeat domain 87 239 IPR011990 GO:0005515
Aev04g1236 662 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 470 504 IPR002885 -
Aev04g1236 662 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 260 294 IPR002885 -
Aev04g1236 662 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 400 434 IPR002885 -
Aev04g1236 662 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 505 540 IPR002885 -
Aev04g1236 662 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 435 469 IPR002885 -
Aev04g1236 662 Gene3D Tetratricopeptide repeat domain 351 488 IPR011990 GO:0005515
Aev04g1236 662 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 365 399 IPR002885 -
Aev04g1236 662 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 68 660 - -
Aev04g1236 662 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 330 364 IPR002885 -
Aev04g1236 662 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 541 575 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1236 Aev-Chr4 8013431 8015419 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1236 210 652 Glycosyltransferase AT1G05670 26.637 8.72e-57 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1236 - - adu:107462912 1093.57