Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1220 ATGCCACAACCGCCACGAGAGCTACCTGGGTTCTACTATGACCCAGAGAAAAACAGGTATTTCCCAATCAAGGGCCCAATTCCTGGGTCTTCACGTTCTTCTTCTTCAAAGCCTACTACTCAAAAAGCACCTCCATCCTCTTCAACTCAGGGAAGGAGTAAGAGTAGTTGTAGGAAGCTTAGGAACAGAAGAACCTCTAAGCTGCTTCAGGCTAGGGAGTTGGGTGGTCATCATGCCATTGCCAACCACAATTCTAAGGGCAAATTCACAGAGGAGTTCAGGAAAATACAAGCATCACAGCCTGTGGTATGGAAGTATCAGGGAACAGATAGGATTGGTATTACTGCTTTGAAACATATGCATGTTGATGTGCAGACGGTGGAGGGTCGATGTGAGACAGATATTCTATTGACAGGCAGCACAAATGGTGCATTGAGTTTATGTGAAGCTGGAAGGGATGGAGAATTTATTGATGGTGGGGTGAAATGGATGCCAGAGTGTGTGAAAAATTATGTTAAAGGGAAAACTGATGGGAATAATCCGATGCCTGGGCCAGTTTGCAGACCTAATGGAGGTTCCTTGCTTATGTCATCCAGTATATCTTCAGTAAGATTGGGTCCAAACTGCGCCTCTCATGCTGTGAATAATGGTCCTGTTGTTGGACACGTATTGTTTACAACTTTGGGATCAGAGGTATCAGGTGGATCAGTTTATACTCTTGGTCTTGTTGAACCAATAGATGTTGGGCAAGGTACTAACCTGGGAGCTGCTTCAGTGGATTTGGAAACTGGGACAACTTCATGGTGTTTACGATGTAAAAGTGATGTCTTTGCGCAACAGATTGTTAATTCAGGAAATGTGATTTTATGTGGACTTAGAAATGGGGCAATTGTCAGTGTAGATTTCCGTGAGAAAAGAGAAAGGCTTTCAAGAACACTTATTACACATAGAATACCTAACGCATCATCAGATAAGAATGTTGGAAGTTCTAACAAATACTGGTTCAAGCTCAGTGGAGACATATACCCTTCTCATACCATCAAAATGCCATCATCTATATCCTGTTTGCTGTCACTTCAGTTTGATGATCAATACTTCTTGGCAAGCTCCATGGATGGGACGATGAAGCTCTACGATCGCCGCCTGTTTCAGAGGGGTGCTGTTCAATCTTACGAAGGGCATGTGAATTCCCACACTCGAATACAGCTCGGGGTTGATCCAGCTGAGAGATTTGTTATGTCAGGTGGAGAGGATTGTAAATTACGCACATGGAGTATCAAAACCGGAGAACTGCTTTTTGAGGACAAGTTCTCTGATTCAGTTCTTTCCACTGTATGCTATCAAACTTGTAAAGGCTTTAAAGCAGAGAATGAAAGCCAATACAAGCATGACCCTTCTATAGGTGCATGGCTTGGATCAGATGAAGGACTATTTTATATGCGCTGGTTGTGA 1452 0.4325 MPQPPRELPGFYYDPEKNRYFPIKGPIPGSSRSSSSKPTTQKAPPSSSTQGRSKSSCRKLRNRRTSKLLQARELGGHHAIANHNSKGKFTEEFRKIQASQPVVWKYQGTDRIGITALKHMHVDVQTVEGRCETDILLTGSTNGALSLCEAGRDGEFIDGGVKWMPECVKNYVKGKTDGNNPMPGPVCRPNGGSLLMSSSISSVRLGPNCASHAVNNGPVVGHVLFTTLGSEVSGGSVYTLGLVEPIDVGQGTNLGAASVDLETGTTSWCLRCKSDVFAQQIVNSGNVILCGLRNGAIVSVDFREKRERLSRTLITHRIPNASSDKNVGSSNKYWFKLSGDIYPSHTIKMPSSISCLLSLQFDDQYFLASSMDGTMKLYDRRLFQRGAVQSYEGHVNSHTRIQLGVDPAERFVMSGGEDCKLRTWSIKTGELLFEDKFSDSVLSTVCYQTCKGFKAENESQYKHDPSIGAWLGSDEGLFYMRWL* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1220 483 MobiDBLite consensus disorder prediction 1 62 - -
Aev04g1220 483 Pfam WD domain, G-beta repeat 388 424 IPR001680 GO:0005515
Aev04g1220 483 MobiDBLite consensus disorder prediction 28 55 - -
Aev04g1220 483 ProSiteProfiles Trp-Asp (WD) repeats profile. 391 434 IPR001680 GO:0005515
Aev04g1220 483 PANTHER KATANIN P80 SUBUNIT 13 481 - -
Aev04g1220 483 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 13 481 - -
Aev04g1220 483 SUPERFAMILY WD40 repeat-like 259 446 IPR036322 GO:0005515
Aev04g1220 483 Gene3D - 243 460 IPR015943 GO:0005515
Aev04g1220 483 SMART WD40_4 340 379 IPR001680 GO:0005515
Aev04g1220 483 SMART WD40_4 384 425 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1220 Aev-Chr4 7854062 7867801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1220 364 436 Miscellaneous Gene Families AT5G08390 31.507 6.54e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1220 K11799 - gmx:100798753 664.07