Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1215 ATGCCTCCTCCTCCTCTTCCTCTTCCTCTTCCTCACTCTAATTGGATTCCCCCTTTTACCCTCACAACCCTCCTCCTATTCTCCATACTGCCCCTCCCATCAACCTCCCTCAACCTCACCGCCATCCTCTCCCCCTTCCCGGACTTCTCCCAATTCACCGCCCTCCTCTCCCCCATCTCCCCCGACATCGCCCCCCGCACCTCCCTCTCCCTCCTCGCCGTCCCCAACTCCCGCCTCTCCGCCGCCGCCGCCCACCTCACCCCCTCCGCCCTCCCCGACGTCCTCCGCTACCACGTCCTCCTCCAGTTCCTCTCCCTCTCCGACCTCCACTCCCTCCCTCCCTCCGGCAAGCTCCTCACTACTCTCCTCCAGACCACAGGCCGCGCCCCCGCTAACTCTGGCTCACTCAACCTCACCCGAAACCCCCTAAACGGCGTCGTCACCGTCACTTCCCCTTACTCCCCTTCCTCAAACGCCACCGTTTTGTCCGTCGTCAAAACCCTACCTTACAACGTCACTGTCTTCGCCGTCGACAATCTCCTCCTTCCTTTCGGCCTCGATCTCATGGCCTCCGAGTCTCGCCCAAACCTAGGCCTCAACATCACCAAAGCCTTAATCGACGGCCACAACTTCAACATTGCGGCGTCCATGCTCGCTGCCTCCGGCGTCGTGGACGAATTCGAGGCTGACGAAGGCGGCGCCGGAATCACGATGTTTGTCCCCGTCGACGACGCGTTCGCCGATCTGCCACCCGCTGTGAGCCTACAGTCTCTGCCGGCCGATAAGAAAGCCGTGGTGCTAAAATTCCACGTGCTGCATTCGTATTACCCTCTCGGATCGTTGGAATCGGTGGTGAACCCTCTGCAACCGACGCTAGCCACGGAGGCCATGGGCGCGGGTAGCTTCACGCTCAACATCTCGCGCGTGAACGGCTCCGTCGCGATCAGCACAGGGATCGTTCAAGCTTCGGTGACGCAAACTGTGTTTGATCAGAATCCTGTTGCGATCTTCGGCGTCTCGAAGGTTCTTTTGCCGAGGGAGATCTTCGGGAAGAATCCGATCCCATCGCCGAAGCTCGGATCGATTGCGCCGCCGCCCGACGACGATGCTCTCTCCCCGGAGGGATCGCAAGGTGGACTTGACGGCCAGCCATCGCACCTATCATCGCCGCCAGGGTTCCGCGAGGATATGCGGTCCGATGCCGCAAGAGTTCGTGCTTCCGAATTCAAGTCCTCCATTGTTGTTGTTGTTGTAGCTGTTGTTGTTTGCTGTATAGGGTTTTGTATTTAG 1290 0.5984 MPPPPLPLPLPHSNWIPPFTLTTLLLFSILPLPSTSLNLTAILSPFPDFSQFTALLSPISPDIAPRTSLSLLAVPNSRLSAAAAHLTPSALPDVLRYHVLLQFLSLSDLHSLPPSGKLLTTLLQTTGRAPANSGSLNLTRNPLNGVVTVTSPYSPSSNATVLSVVKTLPYNVTVFAVDNLLLPFGLDLMASESRPNLGLNITKALIDGHNFNIAASMLAASGVVDEFEADEGGAGITMFVPVDDAFADLPPAVSLQSLPADKKAVVLKFHVLHSYYPLGSLESVVNPLQPTLATEAMGAGSFTLNISRVNGSVAISTGIVQASVTQTVFDQNPVAIFGVSKVLLPREIFGKNPIPSPKLGSIAPPPDDDALSPEGSQGGLDGQPSHLSSPPGFREDMRSDAARVRASEFKSSIVVVVVAVVVCCIGFCI* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1215 429 MobiDBLite consensus disorder prediction 355 399 - -
Aev04g1215 429 Pfam Fasciclin domain 210 345 IPR000782 -
Aev04g1215 429 SMART fasc_3 237 346 IPR000782 -
Aev04g1215 429 SMART fasc_3 74 184 IPR000782 -
Aev04g1215 429 ProSiteProfiles FAS1/BIgH3 domain profile. 198 343 IPR000782 -
Aev04g1215 429 ProSiteProfiles FAS1/BIgH3 domain profile. 36 181 IPR000782 -
Aev04g1215 429 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 23 426 IPR033254 -
Aev04g1215 429 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 23 426 - -
Aev04g1215 429 Gene3D FAS1 domain 199 346 IPR036378 -
Aev04g1215 429 Gene3D FAS1 domain 33 183 IPR036378 -
Aev04g1215 429 SUPERFAMILY FAS1 domain 205 345 IPR036378 -
Aev04g1215 429 SUPERFAMILY FAS1 domain 35 184 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1215 Aev-Chr4 7814112 7815401 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1215 - - aip:107639086 630.943