Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1206 ATGGCTACTTCGCGTCCCTATGTCACAGAGCAAGATCTGTACAGTTTTAGGTTTTCCATCTATCAAATTCTCACCATAGTTGAAAAGCTTGAGAAACAAGTAAATGAGGTTGAACAGTTCTATAAATCCCTTGATCTTCAAGTTAACAACATCAAAGACAAAGACAAAGGCCAAGAGAAGCATCTTATTATTGCCACCAAGAATCCACAAAGTGAAGCTGATGCTACAAAAGGAATGCAAGAGCTCATGCTTCAGTTTTCAGCCATCATGCATGAGATAACTCAGCATGAATGGGCTTGGCCTTTTATGAAGCCTGTAGATGTTGAAGGTTTGGGCCTGTATGACTATTATCAGGTTATTGATAAGCCTATGGATTTTAGCACAATAAAAAGTAAAATGGAAGCTAAGGATGGTTCTGGCTATAAGAATGTCAGGGAGATATGTTCTGATGTAAGGTTGATTTTCAAGAATGCAATGAAATACAATGATAAGAACAATGATATCCATGTCATGGCAAAGACCTTGCTGAAAAAGTTTGAAGAGAAATGGCTACTTCTTTTGCTTAAAGTTGATGAAGAGGAAAGAAGATACTTAGAGAAAGAGCAATTGGACAAACAACTAGCTCAACAAGCAACTTATGCCAATATGGCTAAGGATTTAACTGTTACGCTGGATGAGGTTGATATGCATTTGAGGAGTCTTAAAGCATTGGTGATGCAAAAGTGCAGGAAACTTACAGCTCATGAGAAGGTTTTGCTTGTGAAAGCTCTTACCAGATTGTCTCCTGAATACCTCAATAGGGCACTACAAATAGTTTCTGAGAATAATCCATCCTTCAAATATTCTGGTCAACAAGTGAAACTTAACATTGATGCTCAGAGCGACTTCACACTTTGGAGGTTAAACGTTTTCGTAAAACACGCCTTAGATGTTCAGGACAAGAACAACACCAAACGGAGGAGAATTTTGTGA 972 0.3817 MATSRPYVTEQDLYSFRFSIYQILTIVEKLEKQVNEVEQFYKSLDLQVNNIKDKDKGQEKHLIIATKNPQSEADATKGMQELMLQFSAIMHEITQHEWAWPFMKPVDVEGLGLYDYYQVIDKPMDFSTIKSKMEAKDGSGYKNVREICSDVRLIFKNAMKYNDKNNDIHVMAKTLLKKFEEKWLLLLLKVDEEERRYLEKEQLDKQLAQQATYANMAKDLTVTLDEVDMHLRSLKALVMQKCRKLTAHEKVLLVKALTRLSPEYLNRALQIVSENNPSFKYSGQQVKLNIDAQSDFTLWRLNVFVKHALDVQDKNNTKRRRIL* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1206 323 PANTHER TRANSCRIPTION FACTOR GTE1-LIKE ISOFORM X1 6 318 IPR017413 GO:0005634|GO:0006355
Aev04g1206 323 SMART bromo_6 75 188 IPR001487 GO:0005515
Aev04g1206 323 Coils Coil 27 47 - -
Aev04g1206 323 PANTHER OSJNBA0053K19.4 PROTEIN 6 318 - -
Aev04g1206 323 Pfam Bromodomain 87 173 IPR001487 GO:0005515
Aev04g1206 323 Pfam Bromodomain extra-terminal - transcription regulation 244 306 IPR027353 -
Aev04g1206 323 SUPERFAMILY Bromodomain 76 187 IPR036427 GO:0005515
Aev04g1206 323 PRINTS Bromodomain signature 150 169 IPR001487 GO:0005515
Aev04g1206 323 PRINTS Bromodomain signature 113 129 IPR001487 GO:0005515
Aev04g1206 323 PRINTS Bromodomain signature 97 110 IPR001487 GO:0005515
Aev04g1206 323 Gene3D - 41 208 IPR036427 GO:0005515
Aev04g1206 323 ProSiteProfiles NET domain profile. 235 316 IPR027353 -
Aev04g1206 323 Gene3D - 239 316 IPR038336 -
Aev04g1206 323 ProSiteProfiles Bromodomain profile. 94 169 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1206 Aev-Chr4 7741847 7745392 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1206 - - gmx:100818490 348.206