Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1170 ATGATGATAGACCTCAAATATATATGGGTTCTAGTTTCTATCAACAGGTACATTCTTGACACTATAGAGAATGAGAGAACAAGGAATAGGCTAAAACAGAGATGCACATCAAAGTTAAGGATCCAAAAACAGGAATTCTTTGAATTCTCAGAGCAATCAGTGCTGTCAAATCTTTACTGGGGTATTGACAGCATTGAAGCTGCAATTCAAGCACAGCAGAAAGAGGAAAAGTCATTTAGGCTAATGAATTCAGAGCAAATGCTTCAAGTTCCTGCAATGCTTGATGAGGATGAAGTAACAGCAACAATTCCAAACAGTTATTTGGTTTCTTGTTCATACTTTTACCTCTCTGTGGTTAGGAGGTTACAAGGTGATGAGTGGCAAGCAGCTCTGCATTTTCTGCAATCTGTTTTGGTATCACCAAAAGTTGTTTGTACAGAGTTTGCATCAGAACTTTGTGAGAGTCTTTTTCTGCAAGAGAATAACCCCAGAAAGATGAAAATCAGTGGAAGCAGAAATTTGGATTCTGAAGATCAAATGTTTGAAGCAGTTAGGGATATGGCTAGGAGGTACAAGGAGGGTTTGGTGTATTATCAGGTCATGCTTTATGGAGAGACTCCATGGTGGAGAAGTTATTGCAGCAAGCAACAATCAGCACCACATTATATAGAAGCACAATCCAAAGCACCAACATCAGTAGATTCATGCTATGAGGATTTCAGAAACAGCATAGACCTGTTAAATTTGGAAGGCACAAAGTTTCACATAAGCACATTGACAAAACCAGATCATCATCTACAGCAAGAAGCACATGACAGGAAGCTACGTCAATGCTATGGCTTGGATCATGCTCCAACATATCCCATGCAAGAACATTTGGATGAAAGAAGCATAGTTAAGTTTGATTCTAGCAGATTCAACAGGACCATAGAAGATGGTACATTATCCATCTCAAATTTCCATGTAGAGGATGAACTGATTGAGGAAGCGTTGCGGCCGCTAAACTTCCATCTCTTTGATCATGTAACATTTACATCTGCCTGCAAACATTGGCTGAGTCAGAAAAACCACGATGAAGATTCCGAATCGAGGTTGCAAAGATCATATAGCCTTGGAAACTTCAATGAAGTTAGTTCAAACTCCAGAAGATATTCCCTGCATGAACTGTCAGGACTGATTGAAAGAAGAATCTCAGAGCTACATTATTCAAAGGCATTAGGAAAATGTGGCCAAGAATATACTATCGACATCGCATCGATCTATGATAGTCTGAGTGATTCATCATCAGGCACTACCTATGCATCTTTAAGAGATGCAATTTTGGATGAACTGTTAATAGCTATCTCTAGTTCCAAAGAAGTAAGAGAAATAAGAGCATCTGTATCTATTCTAACTACAATAATTTCAAGGAACAAATCAGTCATAGAAGACATCAAGAAGAAAGGTCTAAAGTTGTGTGATTTGGCAAGTGCTCTAAAACAAAATGTCCATGAGGCAGCAATTCTAATCTATTTGATTAATCCATCTCCTATAGATATTAAAACATTGGAACTTCTTCCAATACTAGTGGAGATTGTATGCAATTCAAATAGTCACAAGAGTAAGCCACATTCGCTTCTTCTGACGCCTCACGCAGCATCATTGATGATCATTGAAGAATTGGTAACTTCATTCGACTATGCGACGAATAACACACATTTGGCTGCAATCAGTTCACCTCATGTTCTCAATGGACTTCTAGAAGTTGCAAGAAATGATAATCTAGAAGAGTTTTTCTCCTTGACCACCATTCTTATAAAATGTATGCAGTTTGATGCACAATGTAGAAAGTATGTGTCACAGTTCACTCCTCTTGCTCCTTTTATCCACCTTCTTCAGACAGAAACCGCCCGCGCCAAATGTACGGCACTCGAATTCTTTCATGAAATCCTCTGCGTACCACGATCATCAGCAATTAATCTGTTGCAGCGGATTCAGCAAGAAGAAAACATCAATATAATGCAGATACTAATGCATTGTGCCAATCAATTACAATCTGATCACCAGATTTTAGCTGCAAGCATACTGCTTCAGTTAGACACATTGAACTCATCTGATAAAAGCTTGTACAGAGAAGCAGCAGTGAAGATCCTTCTCAGGGCATTGGCTTCTCAAGAAACTTCAGAGCAGATATTATCTGCATCCATTCTATCAAATCTTGCCGGAACGTATTCTTGGAACGGTGAACCATATACAGCGGCATGGTTGCTAAGAAAGACAGGCTTGACATCTACCTACCACCAGAATAGGATAAGAAACTTCAACTGGTTGGATCAGACCCTACAGGATACTAGCACAGATTTATGGTGCAGTAAAATTGCTAAATGCATATTAAGTGTAGGTGATTCCATATTCCATGCTTTGGAGAATGGATTAAGAAGCAAGATGAAAATGGTTTCTAGAGACTGTCTTGTGGCGATTTCATGGCTTGGATGTCAGATATCGAAATGCCCTGATAGCATAAGATATTCTGCATCTGAGATCATATTAGGTGGAATTGAGCAATTTCTTCATCCTGGTATGGAGTTAGAAGAGAGACTTCTAGCATGTCTCTGCATTTATAACTATGCCACTGGTAAAGGAAAGCAAAAACTAATTCATTTCTCAGAAGGAGTAAAGGAATCACTGAGACGCCTTTCAAATGTAACTTGGATGGCAGAGGAATTACACAAAGTAGCAGATTTCTTGCTGCCAAATATATCACGTATTTCTTGTGTTCACACACAAATCCTTGAGGCAGGTCGCAGCTCTAGCATAGCAGTTTGCTCCCTCATATACTTCAAGGGACTTCTACTCAGTGGATATTCAGATGGAACAATCAAGGTTTGGGATATTAGGGGGCACTCAGCAAGCCTTGTATGGGACATTAAGGAACACAAGAAATCTGTGACATGCTTTTCACTATCTGAACCATTAGACAGCCTCTTAAGTGGATCTGCTGATGGAACCATAAGGGTGTGGAAAATGATCCAGAGAAAGCTGGAATGTGTTGAAGTAATAGCATTGAAGGAATCAATTCATAATTTATATGCATATGGTGAAACAATTTTTGCAGTTACTGAAAGCCAAGGAGTAAAGCTAGTAAACCAATCAAGAGTAATCAGAAGTATTTTCAAAGGTAAATATGTGAAGTGCATGACAGGGACTCAGGGGAAGTTATACATTGGCTGCACAGATTCAAGCATACAGGAGTATTCAACAACATACAACAGAGAACTAGAAATCAAACCACCTACAAGGAGTTGGAGGAAGCAGAGTAAGCCCATACATTCAGTTGTAGCATATAGAGAGTGGTTATATAGTGCAAGTAAGCATGTTGAAGGCACAACATTGAAGGAATGGAAAAGAACTGGGAAACCCAAAATTTCATTCCCTTCTAATAAAGGAGATAACTTTGTTGGCATGGAAGTGGTAGAAGACTTCATTTACCTAATCTCCAGCTCATCACCAAACAATATTCAGATCTGGTTGAGAGGAGCACCAAAAAAATTGGGAAGAATATCAGCAGGAAGCAAGATAACAAGCCTCCTTGCAGCAAATGACATTATACTTTGTGGCACTGAGATGGGACTAATCAAGGGCTGGATCCCTCTGTAG 3636 0.3927 MMIDLKYIWVLVSINRYILDTIENERTRNRLKQRCTSKLRIQKQEFFEFSEQSVLSNLYWGIDSIEAAIQAQQKEEKSFRLMNSEQMLQVPAMLDEDEVTATIPNSYLVSCSYFYLSVVRRLQGDEWQAALHFLQSVLVSPKVVCTEFASELCESLFLQENNPRKMKISGSRNLDSEDQMFEAVRDMARRYKEGLVYYQVMLYGETPWWRSYCSKQQSAPHYIEAQSKAPTSVDSCYEDFRNSIDLLNLEGTKFHISTLTKPDHHLQQEAHDRKLRQCYGLDHAPTYPMQEHLDERSIVKFDSSRFNRTIEDGTLSISNFHVEDELIEEALRPLNFHLFDHVTFTSACKHWLSQKNHDEDSESRLQRSYSLGNFNEVSSNSRRYSLHELSGLIERRISELHYSKALGKCGQEYTIDIASIYDSLSDSSSGTTYASLRDAILDELLIAISSSKEVREIRASVSILTTIISRNKSVIEDIKKKGLKLCDLASALKQNVHEAAILIYLINPSPIDIKTLELLPILVEIVCNSNSHKSKPHSLLLTPHAASLMIIEELVTSFDYATNNTHLAAISSPHVLNGLLEVARNDNLEEFFSLTTILIKCMQFDAQCRKYVSQFTPLAPFIHLLQTETARAKCTALEFFHEILCVPRSSAINLLQRIQQEENINIMQILMHCANQLQSDHQILAASILLQLDTLNSSDKSLYREAAVKILLRALASQETSEQILSASILSNLAGTYSWNGEPYTAAWLLRKTGLTSTYHQNRIRNFNWLDQTLQDTSTDLWCSKIAKCILSVGDSIFHALENGLRSKMKMVSRDCLVAISWLGCQISKCPDSIRYSASEIILGGIEQFLHPGMELEERLLACLCIYNYATGKGKQKLIHFSEGVKESLRRLSNVTWMAEELHKVADFLLPNISRISCVHTQILEAGRSSSIAVCSLIYFKGLLLSGYSDGTIKVWDIRGHSASLVWDIKEHKKSVTCFSLSEPLDSLLSGSADGTIRVWKMIQRKLECVEVIALKESIHNLYAYGETIFAVTESQGVKLVNQSRVIRSIFKGKYVKCMTGTQGKLYIGCTDSSIQEYSTTYNRELEIKPPTRSWRKQSKPIHSVVAYREWLYSASKHVEGTTLKEWKRTGKPKISFPSNKGDNFVGMEVVEDFIYLISSSSPNNIQIWLRGAPKKLGRISAGSKITSLLAANDIILCGTEMGLIKGWIPL* 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1170 1211 Gene3D - 927 1187 IPR015943 GO:0005515
Aev04g1170 1211 Gene3D - 418 913 IPR011989 -
Aev04g1170 1211 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 969 1002 - -
Aev04g1170 1211 ProSiteProfiles Trp-Asp (WD) repeats profile. 943 966 IPR001680 GO:0005515
Aev04g1170 1211 PANTHER OS04G0584500 PROTEIN 224 1211 - -
Aev04g1170 1211 Pfam WD domain, G-beta repeat 934 957 IPR001680 GO:0005515
Aev04g1170 1211 Pfam WD domain, G-beta repeat 967 1001 IPR001680 GO:0005515
Aev04g1170 1211 ProSiteProfiles Trp-Asp (WD) repeats profile. 969 1002 IPR001680 GO:0005515
Aev04g1170 1211 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 224 1211 - -
Aev04g1170 1211 ProSitePatterns Trp-Asp (WD) repeats signature. 944 958 IPR019775 -
Aev04g1170 1211 SUPERFAMILY ARM repeat 437 892 IPR016024 -
Aev04g1170 1211 SUPERFAMILY WD40 repeat-like 934 1171 IPR036322 GO:0005515
Aev04g1170 1211 SMART WD40_4 962 1001 IPR001680 GO:0005515
Aev04g1170 1211 SMART WD40_4 917 957 IPR001680 GO:0005515
Aev04g1170 1211 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 8 235 - -
Aev04g1170 1211 PANTHER OS04G0584500 PROTEIN 8 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1170 Aev-Chr4 7451769 7459428 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1170 - - gmx:100789287 1844.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1170 04 7451769 7459428 Aev04g1170 04 7451769 7459428 ECH