Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1133 ATGTCATCTTTGAGCAAGGAATTGGTGTTCCTCATCCTTCAATTTCTCGACGAAGAGAATTTCAAGGAAACTGTCCACAAGTTGGAGCAAGAATCTGGATTCTGGTTCAATATGAAGTACTTCGAAGAGAAAGTGGTTAATGGGGAATGGGAAGAAGCTGAGAAGTACCTTTCTGGGTTCACAAAAGTCGATGACAATCGTTACTCCATGAAAATATTCTTTGAGATTAGGAAGCAGAAGTATCTTGAAGCCTTGGACAGGAATGAAAAAACAAAGGCTGTTGAAATACTGGTGAAGGATTTAAGAGTTTTTTCAACCTTTAACGAAGATTTGTACAAAGAGATTACTCATCTTTTAACCCTTGACAACTTTAGGGAGAATGAACAGCTATCAAGGTATGGTGATACGAAATCAGCTCGGAACATAATGCTGGTAGAGGTTAGGAAACTGATCGAAGGGAATCCCTTGTTTCGCGATAAGCTTGCTTTCCCTGCATTGAGGGCAGCACGGTTAAGGACTCTGATTAATCAGAGTTTGAATTGGCAGCATCAGCTGTGCAAGAATCCAAAGCCAAATCCAGACATCAAAACTCTGTTTAATGACCACACATGTTCTCCTGCAAATGGGGCTCGTGCACCGACTCCTCCTCCTGTCACTCTTCCTGTCTCAGCTTTTGCAAGGCCTTCATCATATGCTCCATTAGGAGCGCCGCCCGGTGGACCATTTCCACCGGCATCAGCTATTGCTAATGTCAATACTTTAGCGGGATGGATGGTGAATGCAAATCCTTCCCCATCTGTTCAATCACCTATGGTTTCGGCTTCACCATTGCCTGGTCCACCAACTCAAGTCTCCATGCTGAAGCATTCTAGAACACCTTCAAATGGTCTAGGAATGATGGATTTTCAAAATAATGATCATGAGCAGCTAGTGAGACGGTTGCGATCAACACAATCTGTTGATGAGGTCACATATGCTGTTGCACCTCAACAAGTCTTATGGTCACTTGATGATCTTCCTAGAACTGTTGTCTGTGCGCTACATCAGGGATCGGCGGTGACAAGCATGGATTTCCATCCTTCGCTTCATTCCTTACTTGCCGTTGGATGTGGAAATGGCGAACTTTCACTCTGGGAAGCCGGGCTGAAAGAGAGGATGATATCAAAGCCTTTCAAAGTGCATAACATTGCTGCTTGTTCTGTCTTTTTTCAGGCTGGATATGTGAAAGACTCATCCATTTCTGTCAGTCGCGTATCATGGAGTCCAGATGGGAATTTTATTGGGATTGCTTTCACAAAACATTTGATTCATTTATATGCTTATCAAGCTCCTAGTGATCTGCAGCACCATGTGGAGATTGATGCTCATGTTGGTAGTGTAAATGACTTGGCATTTTCTTACCCAAACAGACAACTATCAGTTATAACTTGTGGAGATGACAAGCTGATAAAGGTGTGGGATTTGACTGGACGGAAGCTCTTTCACTTTGATGGTCATGCAGCACCTGTTTATTCTGTTTGTCCTCACCAAAAGGAAAACATCCAGTTCATATTCTCTACTGCTGTTGATGGTAAAATCAAGGCCTGGTTGTATGATAACATGGGCTCTAGGGTGGACTATGATGCTCCGGGGCAGTGGTGCACCACAATGCTCTATAGTGGTGATGGAAGTAGATTGTTCTCTTGTGGGACCGGTAAAGATGGAGATTCTTTCCTAGTTGAGTGGAATGAAAGCGAAGGAGCGGTAAAGAGAACATATTCTGGGTTTAGGAAGAAATCTACTGGTGTTGTGCAATTTGACATCGCAAAGAATCGCTTTCTGGCTGCTGGTGAAGATAACGAGATAAAGTTTTGGGACATGGATAATGTCAATGTTTTGGCTAGTACAGATGCTGATGGTGGTCTTCCTAGTCTACCTCGGTTGAGGTTCAATAAGGCTGGAAATCTGCTCGCTGTTGCGACGACAGACAATCATTTCAAAGTGCTTGCTAATGCTGATGGTATCAAGTACTTGAGGACCATCGAAGCTCGGTCTGCTGAAGCATCTAAAGCACAACCATTTGAGACTAAGGCATCTGGCTCTTCTGTGGCAGTGAATATCAGTCCACTCATCGCCAAAGCAGAACCTGTGGACAGAAGCTCTCCTGCTCAGACGGCACTCGCTGTTGACCGAGATGATTCTCCTCCTACAAACATAGAGAAGAAAAGACGCGTCGATGACGCGCCTAAAGCTTGGAAAGTAGCAGAAGTAGTTGATCCTATTCAATGTTTGATAGTTACTCTGCCAGATAACATGGGTCCCAATAACAAGGTTGCTCGTCTTCTCTACACAAATTATGGGGCTGGTCTTCTTGCTCTTGGTTCTAAGGGGATTCAGAAGCTGTGGAAATGGAACCGCAATGAACTGAATCCGAGTGGAAAGGCGACGGCAAGTGTTTTTCCACAACATTGGCAACCTAGCACTGGTCTTGTCATGGCTAATGATGTCCCAGATAATTCTGAAGGAGTAATTCCTTGCATAGCACTCTCAAGGAATGACTCATATGTTCTGTCTGCATGCGGAGGAAGAATTTCACTCTTCAACATGATGACATTCAAGATAATGGCAAAATTTATGCCGACTCCTCCATGTTCAACTTCCCTTGCGTTTCACCCTGAAGACAATAACATCGTTGCGATCGGAGTAGACGATGGATCAATTCAAATTTACAATGTTAGGGTGGATGAGGTCAAAACTAAATTGAAGGGTCATCAGAAGGCCATAACTGCTTTTGCTTTTTCAACTCAACTGGGTCTCTTGGTTTCATCAGGTGCTGATGCTCAGCTTTGCTTTTGGAGCCTTGACTCATGGGACAAGAAGAACTCGCTGTCGATCAAATCGCCCGATGGAAATGCGCTGGTTGGCGATACTCGAGTCCAATTCAACATTGATCAAATGCACTTGCTGGTAAATCATGAATCGCAGCTAACGATATATGATGCGGTGAAAATGGAACGGGTTCATCAGTGGGTGCCACAAGGTGCTATTTCTGGTTCCATATCCTCTGCAACATATTCCTGCGACAGCAAGTTAATTTACGCCACTTTCACTGATGGAAATATTGGAGTATTTGAAGCTGACAGCCTCAAACTAAAATGTCGGATTGCTACATCTGCCTACTTACTCCAGAGCTCATTAGACAGCCGAAGTGTGTATCCTGTTGTTATTGCTGCACATCCACAGGAGCCAAATCAATTCACAGTTGGAATGTCAGATGGCTCTATTAAGGAGATCGGCATCAGCCCCACTCTTGAGGTGGCCGCCATCGTGTCGCCTGCCTGTGGCCTTCTCGTTGTATGCCAGTTGTCGACCGCCTCGCCGATGGCAACCCTGCCTCCTATCGTGCGGCCAAGCCTTCATGCCGCTTGCTTCCGGTGA 3417 0.4475 MSSLSKELVFLILQFLDEENFKETVHKLEQESGFWFNMKYFEEKVVNGEWEEAEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDRNEKTKAVEILVKDLRVFSTFNEDLYKEITHLLTLDNFRENEQLSRYGDTKSARNIMLVEVRKLIEGNPLFRDKLAFPALRAARLRTLINQSLNWQHQLCKNPKPNPDIKTLFNDHTCSPANGARAPTPPPVTLPVSAFARPSSYAPLGAPPGGPFPPASAIANVNTLAGWMVNANPSPSVQSPMVSASPLPGPPTQVSMLKHSRTPSNGLGMMDFQNNDHEQLVRRLRSTQSVDEVTYAVAPQQVLWSLDDLPRTVVCALHQGSAVTSMDFHPSLHSLLAVGCGNGELSLWEAGLKERMISKPFKVHNIAACSVFFQAGYVKDSSISVSRVSWSPDGNFIGIAFTKHLIHLYAYQAPSDLQHHVEIDAHVGSVNDLAFSYPNRQLSVITCGDDKLIKVWDLTGRKLFHFDGHAAPVYSVCPHQKENIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPGQWCTTMLYSGDGSRLFSCGTGKDGDSFLVEWNESEGAVKRTYSGFRKKSTGVVQFDIAKNRFLAAGEDNEIKFWDMDNVNVLASTDADGGLPSLPRLRFNKAGNLLAVATTDNHFKVLANADGIKYLRTIEARSAEASKAQPFETKASGSSVAVNISPLIAKAEPVDRSSPAQTALAVDRDDSPPTNIEKKRRVDDAPKAWKVAEVVDPIQCLIVTLPDNMGPNNKVARLLYTNYGAGLLALGSKGIQKLWKWNRNELNPSGKATASVFPQHWQPSTGLVMANDVPDNSEGVIPCIALSRNDSYVLSACGGRISLFNMMTFKIMAKFMPTPPCSTSLAFHPEDNNIVAIGVDDGSIQIYNVRVDEVKTKLKGHQKAITAFAFSTQLGLLVSSGADAQLCFWSLDSWDKKNSLSIKSPDGNALVGDTRVQFNIDQMHLLVNHESQLTIYDAVKMERVHQWVPQGAISGSISSATYSCDSKLIYATFTDGNIGVFEADSLKLKCRIATSAYLLQSSLDSRSVYPVVIAAHPQEPNQFTVGMSDGSIKEIGISPTLEVAAIVSPACGLLVVCQLSTASPMATLPPIVRPSLHAACFR* 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1133 1138 ProSiteProfiles Trp-Asp (WD) repeats profile. 453 496 IPR001680 GO:0005515
Aev04g1133 1138 SMART Lish 4 36 IPR006594 GO:0005515
Aev04g1133 1138 PANTHER TRANSDUCIN FAMILY PROTEIN/WD-40 REPEAT PROTEIN 1 1091 - -
Aev04g1133 1138 MobiDBLite consensus disorder prediction 712 738 - -
Aev04g1133 1138 Pfam WD domain, G-beta repeat 448 487 IPR001680 GO:0005515
Aev04g1133 1138 Pfam WD domain, G-beta repeat 912 946 IPR001680 GO:0005515
Aev04g1133 1138 Gene3D - 282 567 IPR015943 GO:0005515
Aev04g1133 1138 SMART ctlh 34 92 IPR006595 -
Aev04g1133 1138 ProSiteProfiles LIS1 homology (LisH) motif profile. 4 36 IPR006594 GO:0005515
Aev04g1133 1138 ProSiteProfiles Trp-Asp (WD) repeats profile. 914 955 IPR001680 GO:0005515
Aev04g1133 1138 ProSitePatterns Trp-Asp (WD) repeats signature. 474 488 IPR019775 -
Aev04g1133 1138 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 321 951 IPR011047 -
Aev04g1133 1138 Gene3D - 764 1104 IPR015943 GO:0005515
Aev04g1133 1138 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 914 949 - -
Aev04g1133 1138 ProSiteProfiles Trp-Asp (WD) repeats profile. 597 628 IPR001680 GO:0005515
Aev04g1133 1138 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 34 92 IPR006595 -
Aev04g1133 1138 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 1091 IPR027728 GO:0006355
Aev04g1133 1138 SMART WD40_4 996 1038 IPR001680 GO:0005515
Aev04g1133 1138 SMART WD40_4 820 861 IPR001680 GO:0005515
Aev04g1133 1138 SMART WD40_4 405 440 IPR001680 GO:0005515
Aev04g1133 1138 SMART WD40_4 340 379 IPR001680 GO:0005515
Aev04g1133 1138 SMART WD40_4 907 946 IPR001680 GO:0005515
Aev04g1133 1138 SMART WD40_4 579 619 IPR001680 GO:0005515
Aev04g1133 1138 SMART WD40_4 446 487 IPR001680 GO:0005515
Aev04g1133 1138 SMART WD40_4 533 576 IPR001680 GO:0005515
Aev04g1133 1138 SMART WD40_4 489 530 IPR001680 GO:0005515
Aev04g1133 1138 SMART WD40_4 864 904 IPR001680 GO:0005515
Aev04g1133 1138 Gene3D - 568 684 IPR015943 GO:0005515
Aev04g1133 1138 SUPERFAMILY YVTN repeat-like/Quinoprotein amine dehydrogenase 960 1091 IPR011044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1133 Aev-Chr4 7156428 7168078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1133 333 722 Miscellaneous Gene Families AT5G08390 23.934 5.67e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1133 - - jre:108994795 1594.33