Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1128 ATGGGTGTCTTCACTTCGGAAAGTGAGCTTGTTTCATCTGTAGCTCCTGCAAAGCTATACAAAGCCATGGTGTCTGATTTTGGCAATGTGTGGCCAAAAGCTTTACCAGACTTCATTAAGAAGGCTGAAACCATTGAAGGAGATGGAAGTGTTGGATCCATCAAGAAGCTCACTCTTGCTGAGGGATATGTGAAGCACAAGGTAGATGCGGTTGACACAGAGAACTTTGTGTACCACTACAGTATAATTGAAGGCACAGTTTTGCCAGAAACAGTAGAGAAGATCTCTAATGAGTACAAATTGGTGCCAAGTGCTGATGGAGGGTGCATTGTCAAGTCCATAAGCAAATACTACACAAAAGGAGATGAGCAACTCACAGAGGAGTTTCTCAATGCTGGCAAGGAAAAATCTGCTGGTTTCACCAAGGCTGTTGAGGGTTATATCTTGGCTAATCCTGATTACAACTAA 468 0.4295 MGVFTSESELVSSVAPAKLYKAMVSDFGNVWPKALPDFIKKAETIEGDGSVGSIKKLTLAEGYVKHKVDAVDTENFVYHYSIIEGTVLPETVEKISNEYKLVPSADGGCIVKSISKYYTKGDEQLTEEFLNAGKEKSAGFTKAVEGYILANPDYN* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1128 155 Pfam Pathogenesis-related protein Bet v 1 family 1 151 IPR000916 GO:0006952
Aev04g1128 155 PANTHER NODULIN-13 1 155 - -
Aev04g1128 155 PANTHER - 1 155 - -
Aev04g1128 155 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 85 117 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1128 155 PRINTS Major pollen allergen Bet V1 signature 106 122 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1128 155 PRINTS Major pollen allergen Bet V1 signature 81 94 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1128 155 PRINTS Major pollen allergen Bet V1 signature 140 150 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1128 155 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1128 155 PRINTS Major pollen allergen Bet V1 signature 62 81 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1128 155 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1128 155 Gene3D - 2 155 IPR023393 -
Aev04g1128 155 CDD Bet_v1-like 4 147 - -
Aev04g1128 155 SUPERFAMILY Bet v1-like 2 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1128 Aev-Chr4 7123181 7124594 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1128 - - gmx:100306363 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1128 04 7123181 7124594 Aev04g1128 04 7123181 7124594 ECH