Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1127 ATGGGTGTTTACACTTTCGAAGATGATCACCCCTCAACTCTTGCCCCAGCTACAATATACAAAGCTCTTGTGAAAGATTCTGATGAGATCCTCCCAAAGACTATTGATGCCATCCAGAGCGTTGAAACCGTTGAAGGAGATGGAGGGGTCGGATCTGTCAAGAAGATCACTGGTGTTGAAGGTGGGAAAACGGGGTATGTGCTGCACAAAGTAGAAGTGGTGGATGAGGCGAACTTTGTATACGACTACAGCATAGTGGGAGGCACAGGATTAGATGAGAGCTTGGAAAAGGTGACATTCAAGACTAAGATTGTTGAGGGCCCCAATGGTGGATCCGTCGGTAAAGTCACAGTTTCATACCACACCAAGGGCGACGCAGCGCTCTCTGATGCCGTGCGTGACGACACCAAGGCCAAGGGTGTTGGCATTTTCAAGGCCGTTGAGGGCTACGTTTTGTCTAACCCTCATCTTTACTAG 477 0.4885 MGVYTFEDDHPSTLAPATIYKALVKDSDEILPKTIDAIQSVETVEGDGGVGSVKKITGVEGGKTGYVLHKVEVVDEANFVYDYSIVGGTGLDESLEKVTFKTKIVEGPNGGSVGKVTVSYHTKGDAALSDAVRDDTKAKGVGIFKAVEGYVLSNPHLY* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1127 158 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1127 158 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1127 158 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1127 158 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1127 158 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1127 158 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1127 158 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1127 158 PANTHER - 1 156 - -
Aev04g1127 158 Gene3D - 2 157 IPR023393 -
Aev04g1127 158 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 88 120 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1127 158 SUPERFAMILY Bet v1-like 2 156 - -
Aev04g1127 158 Pfam Pathogenesis-related protein Bet v 1 family 1 154 IPR000916 GO:0006952
Aev04g1127 158 CDD Bet_v1-like 5 151 - -
Aev04g1127 158 PANTHER ABA-RESPONSIVE PROTEIN 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1127 Aev-Chr4 7111062 7112336 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1127 - - gmx:100305867 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1127 04 7111062 7112336 Aev01g2911 01 31150285 31150888 PCT