Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1125 ATGGTTGTTGCTTCCCAGGAATATGCTACCCCTGCTGCTGTGCCTCCTGCTAGGCTCTTCAAAGCCATGGCACTAGATTTCCACAACCTCTTCCCTAAGATTGTCGATGCCATTCAGAGTATTGAGTTCACTCAAGGAACTGGTGGTCCTGGAACCATCAAGAAGCTCACCGTTATTGAAGGTGGAGAAACCAAGTATGTGTTGCACAGAGTTGATGCAATTGATGAGGCAAACTTTGTGTACAACTTCAGCATAATTGGGGGAACAGGGTTGCCTGAAACAACAGAGAAGGTCCAATTTGAGAGCCAATTGGTGGAAGCACCAAATGGAGGGTCCCTTAGGAAGGTACATGTCCAGTTTTTCAGTAAGGGTGATGCTCAGATCAGTGATGAGGAGCTTAAGGCTAGCAAGACCAAGGTTGAAGGGGTTGTTAAGCTTGTTGAGGGCTACCTTTTGGCTAATCCTGATTACTAG 474 0.4662 MVVASQEYATPAAVPPARLFKAMALDFHNLFPKIVDAIQSIEFTQGTGGPGTIKKLTVIEGGETKYVLHRVDAIDEANFVYNFSIIGGTGLPETTEKVQFESQLVEAPNGGSLRKVHVQFFSKGDAQISDEELKASKTKVEGVVKLVEGYLLANPDY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1125 157 Pfam Pathogenesis-related protein Bet v 1 family 3 154 IPR000916 GO:0006952
Aev04g1125 157 PANTHER - 1 157 - -
Aev04g1125 157 SUPERFAMILY Bet v1-like 6 157 - -
Aev04g1125 157 PANTHER PATHOGENESIS-RELATED PROTEIN 10 1 157 - -
Aev04g1125 157 CDD Bet_v1-like 5 151 - -
Aev04g1125 157 Gene3D - 3 157 IPR023393 -
Aev04g1125 157 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1125 157 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1125 157 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1125 157 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1125 157 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1125 157 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aev04g1125 157 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1125 Aev-Chr4 7103016 7104047 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1125 - - gmx:100810115 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1125 04 7103016 7104047 Aev04g1125 04 7103016 7104047 ECH
Aev04g1125 04 7103016 7104047 Aev01g2909 01 31141921 31142507 PCT