Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1097 ATGTTCCTTTTTGATTGGTTTTATGGGATTTTGGCATCCCTTGGGCTGTGGCAAAAGGAGGCGAAAATCTTGTTCCTAGGGCTTGATAATGCTGGCAAGACCACTTTGCTTCACATGCTCAAAGATGAGAGGCTGGTTCAGCATCAACCAACTCAATACCCAACTTCGGAGGAGCTTAGTATTGGGAAGATCAAATTCAAAGCTTTTGATTTGGGTGGTCACCAAATTGCTCGCAGAGTCTGGAGGGATTATTATTCTCAGGTGGATGCTGTAGTTTATCTGGTTGATGCATATGACAAGGAAAGGTTTGCAGAATCAAAGAAGGAACTAGATGCTCTTCTTGCAGATGAGTCACTAGCAAAAGTTCCTTTCCTCATCTTGGGAAACAAGATTGACATACCTTATGCGGCGTCCGAGGACGAGTTGCGCTATCACATGGGGCTTACCAACTTCACCACCGGAAAGGGCAAGAAAAGAATAGCCATTCCTAATTTACTGCTTCAAAATATCAGAGTTTAG 519 0.4355 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWRDYYSQVDAVVYLVDAYDKERFAESKKELDALLADESLAKVPFLILGNKIDIPYAASEDELRYHMGLTNFTTGKGKKRIAIPNLLLQNIRV* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1097 172 ProSiteProfiles small GTPase Arf family profile. 14 170 - -
Aev04g1097 172 Gene3D - 1 170 IPR027417 -
Aev04g1097 172 PRINTS GTP-binding SAR1 protein signature 22 45 IPR006689 GO:0003924|GO:0005525
Aev04g1097 172 PRINTS GTP-binding SAR1 protein signature 50 74 IPR006689 GO:0003924|GO:0005525
Aev04g1097 172 PRINTS GTP-binding SAR1 protein signature 122 143 IPR006689 GO:0003924|GO:0005525
Aev04g1097 172 PRINTS GTP-binding SAR1 protein signature 77 102 IPR006689 GO:0003924|GO:0005525
Aev04g1097 172 Pfam ADP-ribosylation factor family 8 156 IPR006689 GO:0003924|GO:0005525
Aev04g1097 172 ProSiteProfiles small GTPase SAR1 family profile. 14 172 - -
Aev04g1097 172 TIGRFAM small_GTP: small GTP-binding protein domain 19 135 IPR005225 GO:0005525
Aev04g1097 172 PANTHER RE74312P 1 158 IPR006687 GO:0005525|GO:0006886
Aev04g1097 172 PANTHER BNAA09G15410D PROTEIN 1 158 - -
Aev04g1097 172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 147 IPR027417 -
Aev04g1097 172 SMART sar_sub_1 4 170 IPR006689 GO:0003924|GO:0005525
Aev04g1097 172 CDD Sar1 2 164 - -
Aev04g1097 172 SMART arf_sub_2 4 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1097 Aev-Chr4 6871536 6873099 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1097 K07953 - qsu:112007278 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1097 04 6871536 6873099 Aev04g1097 04 6871536 6873099 ECH
Aev01g2889 01 31035235 31036847 Aev04g1097 04 6871536 6873099 PCT