Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1090 ATGTCTTCTTCTTCTTCTTCTCGTTCGACTAGGAAGATGGGTACCATGAAATTTTGCAGCGAATGCAACAACATTCTGTACCCTAAGGAAGACAAGGAGCTTAGTATTCTTCTCTACGCTTGCCGCAATTGCAATCACGAGGAGGTTGCTGATAGCAACATTGTGTATAGAACCAAGATACATCATTCTTCTGGAGAGGGAACTCAAGTGTCGCAGAATGTAGCCGCGGATCCTACTCTTCCTCGCACCAAGACGGCTCGCTGCAGTCAATGCAACCATGGAGAAGCTGTCTTTTTCCAGGGAATGATGGCGAGGGAACAGCTAAAGGTGAAGAAGGAATGTGCCTTTTCTTTGTTTGCTGCAACCCAAACTGTGGACACCGATGGAGAGACTGAGGGATGCTCAATTCACTGTTCTGTAATTGGTAGATTCAACATATTCTGTGGTCCAACCTTGGATGGAATACAGAAAAAGTTTGTAGTTACCAATCTATAA 495 0.4465 MSSSSSSRSTRKMGTMKFCSECNNILYPKEDKELSILLYACRNCNHEEVADSNIVYRTKIHHSSGEGTQVSQNVAADPTLPRTKTARCSQCNHGEAVFFQGMMAREQLKVKKECAFSLFAATQTVDTDGETEGCSIHCSVIGRFNIFCGPTLDGIQKKFVVTNL* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1090 164 Pfam RNA polymerases M/15 Kd subunit 16 52 IPR001529 GO:0006351
Aev04g1090 164 Gene3D - 59 115 - -
Aev04g1090 164 SMART rpol9cneu 17 70 IPR001529 GO:0006351
Aev04g1090 164 PANTHER DNA-DIRECTED RNA POLYMERASE 13 105 IPR012164 GO:0006351
Aev04g1090 164 ProSitePatterns RNA polymerases M / 15 Kd subunits signature. 18 44 IPR019761 -
Aev04g1090 164 Gene3D - 13 58 - -
Aev04g1090 164 PANTHER DNA-DIRECTED RNA POLYMERASE SUBUNIT 13 105 - -
Aev04g1090 164 SUPERFAMILY Zinc beta-ribbon 65 101 - -
Aev04g1090 164 SUPERFAMILY Zinc beta-ribbon 15 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1090 Aev-Chr4 6832095 6834423 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1090 K03017 - nnu:104605091 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1090 04 6832095 6834423 Aev04g1090 04 6832095 6834423 ECH