Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1088 ATGCTTTACAGGAACATGGCTTTCCAGAAGTATGTTCCTTCTGGTAAAGCGCCTATTTTGAAAATGAAACCTTTGAGTATTTCCAGTAAGGTGTCTGAGAAAGCTCAGGTTGAGACGTCAAATCAGAATCATCACATGGATGTGGATGTGGACCTTAGGGAAGTTTATTTTCTCATAATGCATTTTCTTTCTGCTGGGCCGTGTCAGAAGACTTACCTACATTTTAGGAATGAACTACTTGAACATCAACTATTACCTAGAAGGTATCACGGTTGGTATTCAAGGAGTGGGGCTCGCAGTGCTGATGAAGATGATGATGGTCTATCATTCCCTTTAAGTTACAACAAATTGTTGGAGAGGTACCCTCACATTGAAAAGGATCACTTGGTAAAGCTTTTGAAGCAATTGTTATTAAATACAGCCTCCCCGTCTCTAGGCGTGAGTAGTGGAAATGCACCAAATGCAGCTGATGTACCTACCCTTCTGGGAAAGGGTTCATTTTCACTTTTGAGTTGTGACCGTGATAAAATAATTGAAGAAGTCAAACGGCCGCCTCCTCACATGCGCTGGCCTCATATGAAAGCCAATCAAGTTCATGGTCTTAGTTTGAGGGAAATTGGGGGTGGTTTTCCAAGACATCATCGTGCATCATCTATACGTGCTGCATGCTATGCCATTGCAAAACCTTCAACCATGGTGCAGAAGATGCAAAATATCAAGAGGACAAGAGGACACCGTAATGCTGTCTATTGTGCTATATTAGATCGGTCAGGGAGATATGTGATTACTGGTTCAGATGATCGCCTTGTAAAAATTTGGTCAATGGAAACTGCATATTGTTTGGCCAGTTGCCGTGGACATGATGGTGATATCACTGACCTGGCTGTGAGTTCAAACAATGCTTTAGTTGCCTCATCATCAAATGACTGTATCATTCGAGTTTGGCGCTTGCCAGATGGCTTACCAATATCAGTTTTGCGGGGACACACTGGAGCTGTTACAGCCATAGCCTTTAGTCCCCGACTGGGTGCTGCATACCACCTTTTATCTTCCTCTGATGATGGAACTTGTAGGATATGGGATGCAAGGTACACCCAGTTAAGTCCAAGAATATATGTTCCGAGGCCTTCTGATTCTGTAATTGGGAGGAACAATGGTCCATCTTCGAGTACTTTGCCACAGAGCCATCAGATATTTTGTTGCGCCTTCAATGCTAATGGAACTGTCTTCGTCACTGGTAGCTCTGACAATCTTGCTAGGGTCTGGATTGCTTGTAAACTAGGTATGGATGACACTGACCAACCAAATCACGAGATAGATGTGCTATCTGGGCATGAAAATGACGTAAATTATGTGCAATTTAGTGGATGTGCAATAGCATCTCGGTTTTCCCCAGCAGAAACTGGGAAGGAGGAAAACCTTCCGAAATTTAAGAATTCCTGGTTGAATCATGACAATATAGTTACCTGCTCTCGTGATGGGAGTGCTATTATATGGATTCCCAAATCACGCAGGTCACATGGGAAAAGTGGTCGCTGGACGCGGGCATATCATTTGAGAGTTCCACCTCCACCTATGCCTCCTCAACCCCAGAGAGGTGGTCCTCGTCAGAGGATTCTACCCACTCCACGCGGTGTAAATATGATTGTTTGGAGCCTAGATAACCGCTTTGTCCTTGCAGCTATTATGGATTGCAGAATATGTGTTTGGAATGCTTCTGATGGCAGCTTAGTACATTCACTGACTGGGCATACTGAATCTACATATGTTCTGGATGTTCATCCGTTTAATCCTCGGATAGCTATGAGTGCTGGATATGATGGAAGAACTATTGTTTGGGATATATGGGAAGGCATGCCTATCCGGATATATGAGATATCTCATTTCAAGTTGGTGGATGGGAAGTTTTCTCCGGATGGGACATCAATTATACTTTCAGATGATGTTGGTCAATTATATATATTAAGCACAGGTCAAGGTGAGTCTCAGAAAGATGCAAAATATGATCAGTTCTTTCTTGGAGATTATCGACCTCTCATTCAGGACACCCATGGTAATGTACTTGACCAGGAAACTCAGATTGTTCCTTATCGACGGAATCTGCAAGATTTGCTTTGTGATTCAGCAATGATACCATACCCAGAACCTTATCAAACTGAATTTCAGCAAAGACGATTGGGAGCTTTAGGCCTTGAGTGGCGGCCATCATCACTAAAGCTTGCTGTTGGTCCAGATTTCAGTCTGGACCCAGATTATCACATGCTTCCATTGGCAGAGTTGGATGTGCTTACAGAACCTCTGCCAGAGTTTGTAGATGTTATGGATTGGGAGCCAGAAATCGAAGTGTTTAGTGATGATACAGATTCAGAATATAATGTTACTGAAGATTGTTCTTCTCGGGGTGAGCAAGGATGTTCAAGCTCTAATGCATCTGGTGATATTGGGTGCAGCACAGACAACAGTGAAAGAGAGGATGCTCATATGGACAGCATTCGCAGATCAAAAAGGAAAAAACAGAAGGCTGAAACTGAGATTATGACTTCTTCTGGGAGACGAGTGAAAAAGAGGAATTTGGATGAGTGTGATGGCAATGCTTTCAGCAGTAGCCGAAGTAGGAAGGGAAAAAGTATCCAAAAAGCATCAAGGAGGAAAACTTCTAAATCAAAATCTTCCAGACCTCAAAGAGCTGCTGCGCGCAATGCTCTACATTTATTTTCTAAAATTACGGGTACAACAGATGGAGAAGAGGATAGTATGGTTGGTGATTTTTCAGATAGTGAATCAACAATGCAAGAGTCTAATATTGACAGTGATGAATCTGATAGAGCTTTACAGGATGACCAACTGAAATATTCAAAGGGAAAAGAAGTTGTATCAATGAATGAATCAGAGGTCATGAATTCTCATGACTTAACTGAGGCAGATACAAATGCAGTTAACAGGAGGAGATTGATTCTCAAGTTTCCAGTTCGTGATTCATCTAAGCCCATGCGTGAATTTGACAACCAGGATGAGTTGGTTGGTTCCTCATCAAAAACTGCTCAAGAAGTTGGTGACTTTAATAGGAACAAATCAAGTTCTAAGGATGCAGGGTGTTATTCTGGCAGTGGAATCAACTGTGCAAATGATGGTACAAATCAAGTAAACCTCACCCACGAAGTAGACCATGTTGACGTGATGGAGAAACTTAAATGGGGAGTGGTTAGGGCTCGTACTTCTAAACCTCCGAGAGTGGGAGAAGCTTTGCCAAAACCTGACACTGTGAACTGTCTAGATGTTCCCACAGATAAAGAAAATGTGAAAGAGGAGAAGGAATTTGGTACATCAACCCCTCCTTCAGAAATCCAAAATGGTGAGGGTAAGGTAGATAGTTTGACAGATATCAATCAGAATTGTGATGGTACTACTTCACATCCTTGTAATCCTTCAGAGAACGGGGAAGAGCTCATAGCTTCCAGCAATTGCAGCAATAAAGATGAATCTCTAGTTTCTGCCAGCGTGATTCCTCAGGATACAATTCCTCCATTTGTTAGCCACAGTGGGGCTGAGCAACTACCTGAACCAAATACTGGTTTTCCTTCTGTTTCCACCAAGCTAAGGTCAAAACGAGGTTCAAAGGATCCTGAATGTTCATCCAAGCATGAAATGAAATCTCCATCGATAAAGAATAGTGCATGTAGCACTAATGCTGATAATAATTTGAACAGTGAACAGTGTATGGTTGTGGCTGAGGACGACACCAACACCAACACAAAAGAAATATCTAATAGGGGAGAAAATGGATCACAAGAAGTAGATCCTCTAGTGACCCAAAATAGCACTTCAAATGGTTCACTACAGCCACATTCACGAAGAGATGAAATGTTTAAAGCTGTTTATAAAAGATCAAGATCACATAAGGCTTTGGCTAATGTTGCTGATCGTTCTGGCTTAGGAGAATCCACTTCTAATGGGGGCAATAATAATTTGAATGCAGTTGTGGATTCCAGTAATGGCACAAATAAGGCTGTTCATAACAATGGATCAATAGAGTTGGAGCCAGCCACATGTGACCCAAATAATGAGGGGAATCATCTCAAAGTGCAGCAAGGACATGAAGATTGTATTGTTAGAAGTCACCATGATGTGTTCACCAGTAGAGGACAATCCACGGAAGAAGAAAGGGGTTCTAGTTCAAAATCAACTGTTGGTTTGAGATCCACTAGGAGTCGGAGATCTAGTTACAATATGCAGGAAATTCGTGAAACTAGTCCTGTAAATAGAAGGAAACCACCACAATCAGCTAATAAAGGATCATGGTTGCTGTTATCAACTCATGAGGAAGGATGCAGATACATTCCACAACAGGGAGATGAGGTTGTTTATTTGAGGCAGGGGCACCAGGAGTACCTAGATTATTATAGCCGCAAAAGAGAATCAGGGCCTTGGACATCGCTTAAGGCACATGTACGGGCTGTAGAATATTGTAGAGTTCAAAGCCTTGAGTATGCTCAGGATACGGGGTCTGGTGACGGCTGCTGCAAAATGGTCCTTCAGTTTGTAGATCCTGATTCAAGCGTCTTTGGCAGATCTTTTAAATTGACTTTACCTGATGTCACTGGTTTCCCAGATTTTCTGGTGGAAAGAACTAGGTTTGATGCTGCTGTGCAAAGAAATTGGACACGCAGGGATAAATGCAGGGTTTGGTGGAAAAATGAGAGTGATTCTGATGGAAGTTGGTGGGATGGGCGAATTATGTGTGAAAAAGCCAAATCTTCTGAATTTCCTGACAGCCCATGGGAGAGGTATACTATTCTGTACAAGAATGACCACACTGAAACACATTTACACAGTCCTTGGGAGCTTTTTGATGCTGGTACTCAATGGGAACAGCCTCATATTGATGATGAGATAAGACATAAGCTGCTATCTGCACTCACCAAATTACAGCAGTCGGGCAATACAATTCAGGATCGTTATGGGGTTCATGAATTGAAGAAAATTTCAAGCAGGACAAAATTTATAAACAGGTTCCCTGTTTCGGTATCACTTGACTTGATACAGTCTAGGTTGGAGAACAATTACTACCGTAGATTGGAGGCTCTGAAGCATGATGTGGATGTTCTCCTTTCTAACGCCGCTGCATTTCTTGAAAAGGATGCAGTGATGTCAGCGAAAATCAAACGCTTATCAGAATGGTTCATGCGGACATTGTCATCTCTATAG 5205 0.4225 MLYRNMAFQKYVPSGKAPILKMKPLSISSKVSEKAQVETSNQNHHMDVDVDLREVYFLIMHFLSAGPCQKTYLHFRNELLEHQLLPRRYHGWYSRSGARSADEDDDGLSFPLSYNKLLERYPHIEKDHLVKLLKQLLLNTASPSLGVSSGNAPNAADVPTLLGKGSFSLLSCDRDKIIEEVKRPPPHMRWPHMKANQVHGLSLREIGGGFPRHHRASSIRAACYAIAKPSTMVQKMQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDLAVSSNNALVASSSNDCIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRLGAAYHLLSSSDDGTCRIWDARYTQLSPRIYVPRPSDSVIGRNNGPSSSTLPQSHQIFCCAFNANGTVFVTGSSDNLARVWIACKLGMDDTDQPNHEIDVLSGHENDVNYVQFSGCAIASRFSPAETGKEENLPKFKNSWLNHDNIVTCSRDGSAIIWIPKSRRSHGKSGRWTRAYHLRVPPPPMPPQPQRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGMPIRIYEISHFKLVDGKFSPDGTSIILSDDVGQLYILSTGQGESQKDAKYDQFFLGDYRPLIQDTHGNVLDQETQIVPYRRNLQDLLCDSAMIPYPEPYQTEFQQRRLGALGLEWRPSSLKLAVGPDFSLDPDYHMLPLAELDVLTEPLPEFVDVMDWEPEIEVFSDDTDSEYNVTEDCSSRGEQGCSSSNASGDIGCSTDNSEREDAHMDSIRRSKRKKQKAETEIMTSSGRRVKKRNLDECDGNAFSSSRSRKGKSIQKASRRKTSKSKSSRPQRAAARNALHLFSKITGTTDGEEDSMVGDFSDSESTMQESNIDSDESDRALQDDQLKYSKGKEVVSMNESEVMNSHDLTEADTNAVNRRRLILKFPVRDSSKPMREFDNQDELVGSSSKTAQEVGDFNRNKSSSKDAGCYSGSGINCANDGTNQVNLTHEVDHVDVMEKLKWGVVRARTSKPPRVGEALPKPDTVNCLDVPTDKENVKEEKEFGTSTPPSEIQNGEGKVDSLTDINQNCDGTTSHPCNPSENGEELIASSNCSNKDESLVSASVIPQDTIPPFVSHSGAEQLPEPNTGFPSVSTKLRSKRGSKDPECSSKHEMKSPSIKNSACSTNADNNLNSEQCMVVAEDDTNTNTKEISNRGENGSQEVDPLVTQNSTSNGSLQPHSRRDEMFKAVYKRSRSHKALANVADRSGLGESTSNGGNNNLNAVVDSSNGTNKAVHNNGSIELEPATCDPNNEGNHLKVQQGHEDCIVRSHHDVFTSRGQSTEEERGSSSKSTVGLRSTRSRRSSYNMQEIRETSPVNRRKPPQSANKGSWLLLSTHEEGCRYIPQQGDEVVYLRQGHQEYLDYYSRKRESGPWTSLKAHVRAVEYCRVQSLEYAQDTGSGDGCCKMVLQFVDPDSSVFGRSFKLTLPDVTGFPDFLVERTRFDAAVQRNWTRRDKCRVWWKNESDSDGSWWDGRIMCEKAKSSEFPDSPWERYTILYKNDHTETHLHSPWELFDAGTQWEQPHIDDEIRHKLLSALTKLQQSGNTIQDRYGVHELKKISSRTKFINRFPVSVSLDLIQSRLENNYYRRLEALKHDVDVLLSNAAAFLEKDAVMSAKIKRLSEWFMRTLSSL* 1735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1088 1734 Gene3D - 1668 1734 IPR036427 GO:0005515
Aev04g1088 1734 ProSiteProfiles Trp-Asp (WD) repeats profile. 284 325 IPR001680 GO:0005515
Aev04g1088 1734 CDD WD40 243 614 - -
Aev04g1088 1734 Gene3D - 393 526 IPR015943 GO:0005515
Aev04g1088 1734 ProSitePatterns Trp-Asp (WD) repeats signature. 601 615 IPR019775 -
Aev04g1088 1734 MobiDBLite consensus disorder prediction 794 817 - -
Aev04g1088 1734 PANTHER PH-INTERACTING PROTEIN-LIKE ISOFORM X1 15 1734 - -
Aev04g1088 1734 SUPERFAMILY Bromodomain 1675 1732 IPR036427 GO:0005515
Aev04g1088 1734 ProSiteProfiles Trp-Asp (WD) repeats profile. 391 422 IPR001680 GO:0005515
Aev04g1088 1734 SUPERFAMILY WD40 repeat-like 234 657 IPR036322 GO:0005515
Aev04g1088 1734 MobiDBLite consensus disorder prediction 1250 1282 - -
Aev04g1088 1734 MobiDBLite consensus disorder prediction 1200 1216 - -
Aev04g1088 1734 MobiDBLite consensus disorder prediction 1099 1119 - -
Aev04g1088 1734 MobiDBLite consensus disorder prediction 1004 1032 - -
Aev04g1088 1734 Pfam Bromodomain 1675 1720 IPR001487 GO:0005515
Aev04g1088 1734 MobiDBLite consensus disorder prediction 875 890 - -
Aev04g1088 1734 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 242 277 - -
Aev04g1088 1734 PANTHER WD REPEAT DOMAIN 9 15 1734 - -
Aev04g1088 1734 Gene3D - 536 670 IPR015943 GO:0005515
Aev04g1088 1734 SMART WD40_4 574 614 IPR001680 GO:0005515
Aev04g1088 1734 SMART WD40_4 533 571 IPR001680 GO:0005515
Aev04g1088 1734 SMART WD40_4 319 361 IPR001680 GO:0005515
Aev04g1088 1734 SMART WD40_4 277 316 IPR001680 GO:0005515
Aev04g1088 1734 SMART WD40_4 435 500 IPR001680 GO:0005515
Aev04g1088 1734 SMART WD40_4 385 423 IPR001680 GO:0005515
Aev04g1088 1734 SMART WD40_4 235 274 IPR001680 GO:0005515
Aev04g1088 1734 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 284 317 - -
Aev04g1088 1734 CDD Bromo_WDR9_I_like 1606 1734 - -
Aev04g1088 1734 MobiDBLite consensus disorder prediction 787 943 - -
Aev04g1088 1734 ProSiteProfiles Trp-Asp (WD) repeats profile. 326 361 IPR001680 GO:0005515
Aev04g1088 1734 ProSiteProfiles Trp-Asp (WD) repeats profile. 581 615 IPR001680 GO:0005515
Aev04g1088 1734 MobiDBLite consensus disorder prediction 1383 1430 - -
Aev04g1088 1734 Gene3D - 216 384 IPR015943 GO:0005515
Aev04g1088 1734 MobiDBLite consensus disorder prediction 1377 1430 - -
Aev04g1088 1734 MobiDBLite consensus disorder prediction 1002 1032 - -
Aev04g1088 1734 MobiDBLite consensus disorder prediction 818 861 - -
Aev04g1088 1734 MobiDBLite consensus disorder prediction 1183 1199 - -
Aev04g1088 1734 MobiDBLite consensus disorder prediction 1250 1285 - -
Aev04g1088 1734 MobiDBLite consensus disorder prediction 1178 1228 - -
Aev04g1088 1734 Pfam WD domain, G-beta repeat 395 422 IPR001680 GO:0005515
Aev04g1088 1734 Pfam WD domain, G-beta repeat 280 315 IPR001680 GO:0005515
Aev04g1088 1734 Pfam WD domain, G-beta repeat 575 614 IPR001680 GO:0005515
Aev04g1088 1734 Pfam WD domain, G-beta repeat 322 361 IPR001680 GO:0005515
Aev04g1088 1734 Pfam WD domain, G-beta repeat 237 274 IPR001680 GO:0005515
Aev04g1088 1734 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 326 361 - -
Aev04g1088 1734 ProSiteProfiles Trp-Asp (WD) repeats profile. 242 283 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1088 Aev-Chr4 6805107 6825181 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1088 233 430 Miscellaneous Gene Families AT5G08390 22.886 6.07e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1088 K11797 - gmx:100818665 2739.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1088 04 6805107 6825181 Aev04g1088 04 6805107 6825181 ECH