Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1083 ATGGCAGCTTCTTCCTTCTTCGCAACTGCCTCGTCTCTACTACTCTTGTTGGCACTATTCACAGTAAATTTTCGCATGACTGATGCTCAAATAGGTGTGTGTTATGGCATGAGTGGAAATAACCTACCATCACCAAGAGAAGTAGTGGATCTTTACAAGGCAAACAACATATGGAGAATGAGGCTCTATGATCCAAACCAAGCAGCTCTAGAAGCACTAAGAAACTCCGGCATCGAGCTCATGCTCGGCGTGCCCAACTCCGACCTCCAAAACCTCGCCACCAACAATGATGCTGCAATTCAATGGGTTCAAAGAAACGTCCTAAACTTCTACCCTAGTGTCAAGATCAAGTATATCGCCGTCGGAAATGAGGTGCATCCAGTTGGAGACTCAACATCATGGATGGCCCAATATGTTCTCCCCGCAATCCAAAACATCTATCAAGCTATAAGATCAAAAGGACTTCATGATCAAATCAAGGTCTCAACCGCAATTGACATGACCCTAATAGGAACCTCTTACCCTCCTTCAAAGGGTTCATTTCGAAACGACATTAGGTCATATTTGGACCCAATCATAGGCTACTTGGTCTATGCAAACGCACCATTGTTCGCTAATGTGTATCCTTATTTTAGTTACACAGGTAACCCACGTGACATATCTCTCCCTTATGCATTGTTCACGTCCCCAAACGTTGTCGTTTGGGACGGTTCAAGAGGGTACCAAAACCTGTTTGATGCGTTGTTGGATTCATTGCATGCGTCGATTGATAGCACTGGAATTGGGTATGTAAAGGTTGTTGTGTCTGAGAGTGGATGGCCTTCAGATGGTGGCTATGCGGCGTCGTATGACAATGCTAGAATTTTCTTTGATAATTTGATTCGGCATGTGAGAAATGTTGGTACTCCAATGAGGCCCGGGCCTATAGAGACTTATTTGTTTGCGATGTTTGATGAGAACCAAAAGGGTCCTCCGGAGATAGAGAAGCATTTTGGGGTGTTTTATCCGAGCAAACAGAAGAAGTATCCGTTTGGTTTTGGTGGAGAAAGAAATAATGATAATGGCAACTTGATTGTTGAAGGGTTCAATAATTCATCGGTTTCTTCTCTTAAGAATGACATGTAA 1125 0.4347 MAASSFFATASSLLLLLALFTVNFRMTDAQIGVCYGMSGNNLPSPREVVDLYKANNIWRMRLYDPNQAALEALRNSGIELMLGVPNSDLQNLATNNDAAIQWVQRNVLNFYPSVKIKYIAVGNEVHPVGDSTSWMAQYVLPAIQNIYQAIRSKGLHDQIKVSTAIDMTLIGTSYPPSKGSFRNDIRSYLDPIIGYLVYANAPLFANVYPYFSYTGNPRDISLPYALFTSPNVVVWDGSRGYQNLFDALLDSLHASIDSTGIGYVKVVVSESGWPSDGGYAASYDNARIFFDNLIRHVRNVGTPMRPGPIETYLFAMFDENQKGPPEIEKHFGVFYPSKQKKYPFGFGGERNNDNGNLIVEGFNNSSVSSLKNDM* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1083 374 ProSitePatterns Glycosyl hydrolases family 17 signature. 264 277 IPR000490 GO:0004553|GO:0005975
Aev04g1083 374 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 20 353 - -
Aev04g1083 374 Pfam Glycosyl hydrolases family 17 31 344 IPR000490 GO:0004553|GO:0005975
Aev04g1083 374 SUPERFAMILY (Trans)glycosidases 31 345 IPR017853 -
Aev04g1083 374 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 20 353 IPR044965 GO:0004553|GO:0005975
Aev04g1083 374 Gene3D Glycosidases 30 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1083 Aev-Chr4 6764298 6765865 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1083 37 351 Glycoside Hydrolase AT4G16260 63.407 2.05e-141 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1083 - - gmx:100801599 551.592