Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1071 ATGGCGGAGAAGTACAACCTCAAGAACCCTGCCGTCAAGCGCATCCTCCAAGAGGTCAAGGAGATGCAATCCAACCCTTCCGATGATTTCATTAGCCTCCCTCTCGAGGAAAATATATTTGAATGGCAATTTGCAATTAGAGGACCTTGTGATACTGAATTTGAGGGTGGAATTTATCATGGACGAATTCAGTTGCCTTCAGAGTATCCATTTAAACCTCCTTCATTCATGTTGTTGACGCCTAATGGTCGTTTTGAGACCCAAACCAAGATTTGCTTGAGCATATCAAATCATCACCCCGAGCATTGGCAACCATCATGGAGCGTAAGGACTGCTCTAGTTGCACTGATTGCATTCATGCCAACCAACCCAAATGGTGCATTGGGCTCATTGGATTACAAGAAAGAAGAGAGGCATACTTTGGCCATTAAATCTCGTGAAGCATCTCCGAAATTTGGGAATCCGGAACGTCAAAAGCTGATTGATGAGATACATGAGTACATGCTAAGCAAAGCACCCCCTGTTCCTCAACTTGGCACCACACCACCTACCGAAGAGGAACACCCGAGAATTGACAAGGCTGAGGCCCAGTCTAACTCACATAATTCTGAGGCTTCACCTGTAAGAGAGGAGATTCCAGATCAAGCAGGTGACAGAATTATTGAAGAAGAGGAAGTAGTTCCTGATGCTAATCCAGCAGGATTTGAAGCTTCCGTGGAGATTCAAATAAGTTTTACGAGGAATCAGTCGCCCCAAAATTCAGATACAAGGGTTCAGAATCCGAAGCCACAGATGAGGGTACAGAAACGTGATGATAGGTTATTCACATGGGCAGCTATTGGACTAACTATTGCAATTGTGGTCCTCTTGCTGAAGAAGTTCATTAAATCTTCCGAATATGGACAAGTTTTCTTGGATAGATCTTAG 927 0.4412 MAEKYNLKNPAVKRILQEVKEMQSNPSDDFISLPLEENIFEWQFAIRGPCDTEFEGGIYHGRIQLPSEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERHTLAIKSREASPKFGNPERQKLIDEIHEYMLSKAPPVPQLGTTPPTEEEHPRIDKAEAQSNSHNSEASPVREEIPDQAGDRIIEEEEVVPDANPAGFEASVEIQISFTRNQSPQNSDTRVQNPKPQMRVQKRDDRLFTWAAIGLTIAIVVLLLKKFIKSSEYGQVFLDRS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1071 308 MobiDBLite consensus disorder prediction 246 266 - -
Aev04g1071 308 SMART ubc_7 13 173 - -
Aev04g1071 308 MobiDBLite consensus disorder prediction 172 214 - -
Aev04g1071 308 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 165 IPR000608 -
Aev04g1071 308 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 6 308 - -
Aev04g1071 308 PANTHER BNAC01G21910D PROTEIN 6 308 - -
Aev04g1071 308 Gene3D Ubiquitin Conjugating Enzyme 2 174 IPR016135 -
Aev04g1071 308 MobiDBLite consensus disorder prediction 246 263 - -
Aev04g1071 308 CDD UBCc 12 127 IPR000608 -
Aev04g1071 308 Pfam Ubiquitin-conjugating enzyme 14 125 IPR000608 -
Aev04g1071 308 SUPERFAMILY UBC-like 11 133 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1071 Aev-Chr4 6719850 6722085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1071 3 306 Miscellaneous Gene Families AT3G17000 63.057 3.79e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1071 K10578 - gmx:100798396 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1071 04 6719850 6722085 Aev04g1071 04 6719850 6722085 ECH