Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1060 ATGGAGGGCGGTGACGAAGGTGTAGACATGGTGGTCGATTCCAACGACAGGGATTTGCAGCAGCAGACCAAGGCCTTCGACAAGCTCACCGACCGCGTCGAGGATCGCCAGCTCGATTCCACTCGCGTCCAAGAGGCCATGGCGTCCATTGCTGCATCTGCTGAAGCCGACCGGAACGCAATGCGCTTGAGGGAGAAAGAATTAGCTGCTGTCAAGATAAATGCAGCAGATGTTGATGTAATTGCAAATGAACTAGAGTTGGACAAAAAGGTGGCAGAAAGAACCTTGCGGGAGCATAAAGGTGATGCAGTTGCTGCCATTCGCCACTTGCTTCACTAG 339 0.528 MEGGDEGVDMVVDSNDRDLQQQTKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADRNAMRLREKELAAVKINAADVDVIANELELDKKVAERTLREHKGDAVAAIRHLLH* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1060 112 Pfam HYPK UBA domain 71 111 IPR044034 -
Aev04g1060 112 Coils Coil 82 102 - -
Aev04g1060 112 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 1 111 - -
Aev04g1060 112 CDD UBA_HYPK 71 111 IPR038922 -
Aev04g1060 112 Gene3D - 72 110 - -
Aev04g1060 112 PANTHER BNAA05G30770D PROTEIN 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1060 Aev-Chr4 6639558 6641083 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1060 - - pop:7485901 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1060 04 6639558 6641083 Aev04g1060 04 6639558 6641083 ECH
Aev01g2867 01 30941541 30942187 Aev04g1060 04 6639558 6641083 PCT