Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1044 ATGGAATTGGAAGCACACGCTTCTTCTTCTTCTTCTTGTCCTTCTCGAAGCGGCGTCGTTTCAGACCCTCCTCCTCCATCACCACCGCCACAACCACCACAGATTTCACTTATTGGCCCTCGTCTGCATCCACCACCACCACCCCCCTCTGGGGTGTTTCTTCCACCCCCACAACCTAATCTGATTCCCTTCCCTTTCAACCCTTCTTTGATCTACGCAATGGATCACCAAAGGTCTATGTCTCTGCTACAGTACATGGCTGATGAAGGACTTGTTCCTTCTACGGAAGACGAAGAGAAAAGGAAGAATGCTATTCAGAAGCTCAAACAGATAGTATCTTCATGGATCAAAACGGTCGCACGGCAACATAGCCTACCAAAACACCAGATTTCTGTTACTTCTGCCACTGTATTGACGTATGGATCTTATGGCCTTGGAGTTCACAGCCCAGAGTCTGACATTGATGCATTGTGCGTTGCTCCTTTCTTTGCGTCCATTTCGGAAGACTTTTTTGGTATTTTGCACGATATGCTTAAAATGAGGCCAGAAGTATCAGAGATTTGCTGTGTCAAGAGTGCGAAAGTTCCTCTAATGCGATTCAAAATTGATGGAATTTCCATTGATCTTCCATACGCTCGCCTTAGAGTCCTATTCGTTCCTCAGAATGTTGACATACTGACCCCATTTTTCATGAGGAATATTGATGAAACTAGTTGGAAAAGCTTGTCTGGTGTACGAGCAAATAAACGCATTCTTCAGCTAGTACCGAATGTTGAGAATTTTCAAGCTATGGTTCGGTGTCTTAAATTATGGGCAAAAAGACGAGGAATTTATGGAACATTACTTGGTTACTTGGGCGGAGTTCATTTGGCAGTTCTTTCAGCTTATGTTTGCCAAAGACATCCTGATGCCACATTAAATACTCTGATCACGAACTTTTTCCGAACGTTTGCATATTGGCCCTGGCCAACACCAGTGATGCTGCAGGAAGGAATGTTGCTCCCACCTGTAGATGCTATGGAAATACGGTCCTTCATGCCTATTTTGCTGCCATCTAGCCCTTACGAGTATTGCCATTCAAATATAACTAAAAGCACTTTCTGCCGGATAAGGTCCGAGTTCGTACGTGGACATAATATGACAAGGGATCTTTTGAAGCCTGATTTCATGTGGGATCATGTATTTGAGTCTTTTCCATACTCAAGAAGATATTCCCAGTTTATCAAGATATACCTGTCTACCCCAAAACAAAGTGAGCTTGGAGACTGGGTTGGCTTGGTCAAGTCGCGCTTCCGAAGTCTTCTTATCATGCTGGAGGGTGTCCATGGTTTCTGTGACCCAAACCCTACAGAATATGTCGACACCGAGAAAGAGGAGCCGAACACGGTTTTCTACTGGGGCGTGCATCCTGCCAAGAACAACTTTGTGGGAGCAGAGATGGTAGAAGGGGAGTTCATGAAGATCATCGGCAATGGCTGCGAAGGATCTCCCGGCCGGATGGAGTTATCCGTCCTAACGGCTTCTCAGCTTCCAAAGAATGCTCAGTTTGATGATAGGAATGTGAAGGGTAGGAAAACATGCTGGAAAGTGGTTGATAGTGATGATAAGAAGAGCAACCAAGTTTTCTCTCAGCATATTCCACATTGCCTTGTTGGCCATGTTTCATCTAATAGTGGGGAGGGTGAATACTTGAGTACCGGTGGCTAG 1707 0.4517 MELEAHASSSSSCPSRSGVVSDPPPPSPPPQPPQISLIGPRLHPPPPPPSGVFLPPPQPNLIPFPFNPSLIYAMDHQRSMSLLQYMADEGLVPSTEDEEKRKNAIQKLKQIVSSWIKTVARQHSLPKHQISVTSATVLTYGSYGLGVHSPESDIDALCVAPFFASISEDFFGILHDMLKMRPEVSEICCVKSAKVPLMRFKIDGISIDLPYARLRVLFVPQNVDILTPFFMRNIDETSWKSLSGVRANKRILQLVPNVENFQAMVRCLKLWAKRRGIYGTLLGYLGGVHLAVLSAYVCQRHPDATLNTLITNFFRTFAYWPWPTPVMLQEGMLLPPVDAMEIRSFMPILLPSSPYEYCHSNITKSTFCRIRSEFVRGHNMTRDLLKPDFMWDHVFESFPYSRRYSQFIKIYLSTPKQSELGDWVGLVKSRFRSLLIMLEGVHGFCDPNPTEYVDTEKEEPNTVFYWGVHPAKNNFVGAEMVEGEFMKIIGNGCEGSPGRMELSVLTASQLPKNAQFDDRNVKGRKTCWKVVDSDDKKSNQVFSQHIPHCLVGHVSSNSGEGEYLSTGG* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1044 568 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 399 491 IPR011068 GO:0003723|GO:0016779|GO:0031123
Aev04g1044 568 CDD NT_PAP_TUTase 100 214 - -
Aev04g1044 568 SUPERFAMILY Nucleotidyltransferase 65 252 IPR043519 -
Aev04g1044 568 MobiDBLite consensus disorder prediction 1 18 - -
Aev04g1044 568 MobiDBLite consensus disorder prediction 1 56 - -
Aev04g1044 568 SUPERFAMILY PAP/OAS1 substrate-binding domain 256 396 - -
Aev04g1044 568 Gene3D - 73 395 - -
Aev04g1044 568 PANTHER POLY A POLYMERASE 64 557 - -
Aev04g1044 568 Pfam Poly(A) polymerase central domain 74 396 IPR007012 GO:0004652|GO:0043631
Aev04g1044 568 Gene3D Poly(A) polymerase predicted RNA binding domain 400 491 - -
Aev04g1044 568 MobiDBLite consensus disorder prediction 19 56 - -
Aev04g1044 568 Gene3D Beta Polymerase, domain 2 93 249 IPR043519 -
Aev04g1044 568 PANTHER NUCLEAR POLY(A) POLYMERASE 3 64 557 - -
Aev04g1044 568 Pfam Nucleotidyltransferase domain 134 169 IPR002934 GO:0016779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1044 Aev-Chr4 6541092 6544517 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1044 K14376 - cit:102610335 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1044 04 6541092 6544517 Aev04g1044 04 6541092 6544517 ECH