Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1041 ATGGCTCGGAAGGGCAATCAGCAAAAGAATGGACTGGACCGTCATGGGTTGAGCCACAAAAAGGGGGTTTCTGGGGGTGTCCTTCCTGGTATGAAAGGTCATGCCAAAGAAGGGACTGCAGTGAAGGTATATCCAGGGGAAGAAATAGCGAATGGAGACCAACAGGGTGGCCTTTCACCGAATGCAAATGGAGTTGCTTCTGCTGGTGGTGGTGACGTTAGCAGTGATAAAAAATCTGAGAGGTTTTCAAGGAAGGAGAAGCAAGGGGTAGATGCAACTCACGACATGGAGGAGTCGGTGTCTTCCGGGAGTAATTCGGGGGATGGCAATCTGAATTCTGATGTTCCAATACAGGAAGAAAATGGGACCTTGCCTGGAAGTAATCAAGGCCAACAGAGTATGATGAGTAGATTGAGCTGTTTACTGGATGATTTGAAAGTAAGAACTTTGGGAGAAAATGCAGAGCTTGCCGATAATGTGATCATTAGGAGAATAAGGTTGTCAGTATTTTCCTTCTTTACAGCAGTTGCTGAGTGGCTAACCAGGCAGAAGCCATTGTTTGTATCCATTACAACTGTTGTTTTTGATGCTTGTGATAATCTCAGAATGAAAGTTAAGAAGGTATATCCCGTTGTCCTAAAATGGCTCATGCATTTGGCGAGCATACTGCTTCTTTTATCAGTGTTTTGGCTGGATTGTGCCATTCGGGGTGTTGATTCATTTGTACGTATGGGGACAACTTCCTTCTTCTCTGTTATATGGTGCAGTGTGTTCTCTGTGATTAGTATGATAGGGATGCTCAAGTTTCTTCTTGTCCTGGGCCTGGCTGCCTTGATTGGTTTTGTTGTTGGGCTCACCCTTGCAGTTTTGGTAGTTGCAATCCTTGGAGTTATTTTCTTGTGGTTTTATGGTAGCTTTTGGACAACAGCATTTTTCATCGTTCTTGGAGGATTGGCATTTTTGTTAAGTCATGAACGTCTGGCACTATTTATCACCACTGTGTATTCTGTATATTGTGCCTGGGTGTACGTTGGGTGGCTTGGTTTGGTATTGGCTTTTAATTTAGCTTTTATCTCAAGCGATGTGCTGATTTACTTCCTCAAGAAAAACATCGAACAACAGAGTAGATCCAATCCTTTTGAGCAAAGAGCTGGAATGCATGGTCAACCAGGCTTCTTTAATGAGGAGCCAATGCAGGGTTCTTCCTCTGAAAATGGACCAGGACCATCTGCCAGTCGTAATGCTGGAATCCCTTCAACTAGTGGTACTGATTCTGATGTCACATCTGAAGATGAAGTTGTCCGATTGTTGAACTGTTCTGATCACTATTCAGCGCTGGGCTTTACGCGGTATCAAGATATTGATGTTTCAGTACTGAAGCGGGAATATAGGAAGAAGGCAATGTTGGTTCATCCTGACAAAAATATGGGTAATGAAAAGGCTGCAGAAGCCTTTAAGAAACTTCAGAATGCATATGAGATACTAATGGATTCCTTGAAGCGAAAAGCATATGATGATGAGTTAAGGAGAGAAGAGCTTTTGGGTGTATTCCGCAAATTCCATAATGCATCCAATAAGAATGGTAGGCGTGGCTTCTTTGCTTCAGGATTTGATCGATCAGATGCAAACGGTGAGGACCCATTTGAGGATTCAAGGCGAATAGCATGCAAAAGATGTGGCGGCTTTCATGTTTGGATACACACTAAGAAACAAAAGGCCCGGGCAAGATGGTGCCAGGATTGCCAAGATTTTCATCAAGCTAAGGATGGTGATGGATGGGTTGAACAATCTTCACAACCATTTCTTTTTGGCTTATTGCAGAAGGTAGATACTCCTTCTGCATATGTGTGTGCTGATAGCAGGATATATAATGCCACTGAATGGTATATCTGTCAGGGTATGAGATGTCCAGCGAATACTCATAAGCCAAGCTTTCATGTCAACACTAGTTTAATGTCCAAGCATAATTCCGGCAAAGGAACCAGTTCAGGTCAAAGAGGTGCAGGGCGGATGCCGCCTAATATGGAAGAAACCATGACAGAGGAAGAGTTCTTCGAGTGGCTGCAGAATGCAGTAGAGTCTGGCGTCTGCGTTAACCTCAACTACACCAATCCATGCGTCTTCTTCTCAAATGGGTACCCTTCCTTTTCTTCTTCTTCTTCTTCGCTGCCATTTCCTCTTCAAACGAAGCCTCCAAAATCAGCATCAGTGGTTGTGAGTGCCCGAAAGAAAGACACCAAGAAAGATGACAACCATAGCTTTGTTCCCAAGCCTGACGAGGCCACTGGCTTCTTCCCCGAAGCTGTGCTCCTTAAAAAGAAGACAGTTGAGGAAGATGGTAAGGTTCTCCCAGAGTTTGAAGATGCTGACGAAAGAGAGCTTTTTGAAGCACTTATGCTTGAGATGGAAAGTGATATGGACGTTGATCAAATGCGCCACTATGAGATTATGTACTTAATTCATGAGAAGCATGAAGAAGAGGTTGCAGCTGTCAATGAGAAAATTCAAGACTTTTTGAGAGAGAAGAAAGGGAGGGTGTGGAGACTGAATGATTGGGGTATGAGAAGGCTGTCTTACAAAATAAAGAAAGCTAAGAATGCTCACTATATGTTGATGAACTTCGAGTTGGATGCCAAGTATATCAACGAGTTCAAGACGCTGTTGGACCAAGATGAACGAGTTATTCGGCATCTCGTGATAAAGAGGGACAAGGCGATCACAGAAGATTGCCCTCCTCCTCCCGAGTTTCATACTCTGCGTGCAAATGCAGATGATTATGATGAAGAAGAATTTGACGAACAAGAATATGAGGATGATTATGATGATGATGAAGAAGAAGACTGGGATGGTGAAGATGAGGACGAGGATGGCGAAGGGGAGGAAATTTATTATATAGATGGCGATGATGATGATGATGATGGCGAAGATAAGAGCGATTATAGAAACAATAAACCAGCAAATGTTAGAAAGCCAGATACAAGAAAATTGAAGGCTGGGAACGTAGCTAGGTAG 3012 0.4336 MARKGNQQKNGLDRHGLSHKKGVSGGVLPGMKGHAKEGTAVKVYPGEEIANGDQQGGLSPNANGVASAGGGDVSSDKKSERFSRKEKQGVDATHDMEESVSSGSNSGDGNLNSDVPIQEENGTLPGSNQGQQSMMSRLSCLLDDLKVRTLGENAELADNVIIRRIRLSVFSFFTAVAEWLTRQKPLFVSITTVVFDACDNLRMKVKKVYPVVLKWLMHLASILLLLSVFWLDCAIRGVDSFVRMGTTSFFSVIWCSVFSVISMIGMLKFLLVLGLAALIGFVVGLTLAVLVVAILGVIFLWFYGSFWTTAFFIVLGGLAFLLSHERLALFITTVYSVYCAWVYVGWLGLVLAFNLAFISSDVLIYFLKKNIEQQSRSNPFEQRAGMHGQPGFFNEEPMQGSSSENGPGPSASRNAGIPSTSGTDSDVTSEDEVVRLLNCSDHYSALGFTRYQDIDVSVLKREYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEILMDSLKRKAYDDELRREELLGVFRKFHNASNKNGRRGFFASGFDRSDANGEDPFEDSRRIACKRCGGFHVWIHTKKQKARARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLLQKVDTPSAYVCADSRIYNATEWYICQGMRCPANTHKPSFHVNTSLMSKHNSGKGTSSGQRGAGRMPPNMEETMTEEEFFEWLQNAVESGVCVNLNYTNPCVFFSNGYPSFSSSSSSLPFPLQTKPPKSASVVVSARKKDTKKDDNHSFVPKPDEATGFFPEAVLLKKKTVEEDGKVLPEFEDADERELFEALMLEMESDMDVDQMRHYEIMYLIHEKHEEEVAAVNEKIQDFLREKKGRVWRLNDWGMRRLSYKIKKAKNAHYMLMNFELDAKYINEFKTLLDQDERVIRHLVIKRDKAITEDCPPPPEFHTLRANADDYDEEEFDEQEYEDDYDDDEEEDWDGEDEDEDGEGEEIYYIDGDDDDDDGEDKSDYRNNKPANVRKPDTRKLKAGNVAR* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1041 1003 MobiDBLite consensus disorder prediction 1 131 - -
Aev04g1041 1003 Coils Coil 926 946 - -
Aev04g1041 1003 MobiDBLite consensus disorder prediction 394 428 - -
Aev04g1041 1003 SUPERFAMILY Chaperone J-domain 436 522 IPR036869 -
Aev04g1041 1003 MobiDBLite consensus disorder prediction 395 427 - -
Aev04g1041 1003 MobiDBLite consensus disorder prediction 74 94 - -
Aev04g1041 1003 SUPERFAMILY Ribosomal protein S6 811 911 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aev04g1041 1003 Gene3D DnaJ domain 429 519 IPR036869 -
Aev04g1041 1003 CDD bS6 813 902 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aev04g1041 1003 CDD DnaJ 441 497 IPR001623 -
Aev04g1041 1003 PRINTS DnaJ domain signature 463 478 IPR001623 -
Aev04g1041 1003 PRINTS DnaJ domain signature 480 500 IPR001623 -
Aev04g1041 1003 Pfam Ribosomal protein S6 813 901 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aev04g1041 1003 TIGRFAM S6: ribosomal protein bS6 811 903 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aev04g1041 1003 MobiDBLite consensus disorder prediction 925 976 - -
Aev04g1041 1003 Coils Coil 821 841 - -
Aev04g1041 1003 ProSitePatterns Nt-dnaJ domain signature. 485 504 IPR018253 -
Aev04g1041 1003 PANTHER OS03G0832900 PROTEIN 1 714 - -
Aev04g1041 1003 SMART dnaj_3 440 500 IPR001623 -
Aev04g1041 1003 PANTHER OS03G0832900 PROTEIN 1 714 - -
Aev04g1041 1003 MobiDBLite consensus disorder prediction 977 997 - -
Aev04g1041 1003 Pfam Cleavage inducing molecular chaperone 551 648 IPR032843 -
Aev04g1041 1003 MobiDBLite consensus disorder prediction 906 1003 - -
Aev04g1041 1003 ProSitePatterns Ribosomal protein S6 signature. 853 862 IPR020815 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aev04g1041 1003 MobiDBLite consensus disorder prediction 95 131 - -
Aev04g1041 1003 Pfam DnaJ domain 441 505 IPR001623 -
Aev04g1041 1003 ProSiteProfiles dnaJ domain profile. 441 508 IPR001623 -
Aev04g1041 1003 Gene3D - 806 909 IPR014717 -
Aev04g1041 1003 Hamap 30S ribosomal protein S6 [rpsF]. 811 904 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1041 Aev-Chr4 6517741 6525735 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1041 1 696 Miscellaneous Gene Families AT5G49580 52.857 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1041 K09534 - gmx:100789594 1067.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1041 04 6517741 6525735 Aev04g1041 04 6517741 6525735 ECH