Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1040 ATGGATGCACGAGGGGATGGGATTTTCCCAGATGAAGTTGTTATTCAGATTCTAGCTAGGTTACCGGTGAAGCCCCTTTTTAGGTGCAAAATAGTGTGCAAGCTCTGGTATAAATTGTCCTTGGATAAGTATTTTATTCAGGTTTACAATGAGGTATCTAGGAAGAACCCCATGATCCTTGTCGAGATTTCGGATTCATCAGAGTCCAAGTCTAGCTTGATTTGTGTTGATAACTTGAGGGGTGTATCTGAATTTTCACTGGATTTCTTGAATGATAGGGTTAAGGTTAGAGCATCTTGCAATGGCCTGTTGTGTTGCTCTAGTATTCCTGATAAGGGTGTTTTTTATGTCTGCAACCCTGTGACTAGGGAGTTTAGGTTGCTTCCCAAGAGTAGGGAAAGGCCTGTGACTAGGTTTTATCCGGATGGGGAAGCGACCTTGGTCGGCTTGGCTTGCGATCCTATGTTTCAGAAGTATAATGTTGTGCTGGCCGGTTGCCATCGTACTTTTGGCCATAGGCCTGATGGGAGTTTCATATGTTTAGTGTTCGATTCAGAGTCGAACAAGTGGAGGAAGTTTATCTCATTCCAAGATGACCATTTTACTCATATGAATAAGAACCAAGTTGTTTATGCCAACAATGCTCTTCATTGGTTGACGGTTAGCGCGAGTTATATACTTGTGCTTGATTTGAGTTGTGACATTTGGAGGAAGATGTCGTTGCCGTATGACTTGATTTATGGTACTGGGAATAGGATTTATCTCTTAGATTTCGATGGCTGCCTTTCTATTATTCAAATTTCGGAGGCATGGATGAGCATATGGGTGCTAAAAGATTACTGGAAAGATGAATGGTGTCTTGTGGATAAGGTGAGCCTGAGGTGTATCAGAGGAATGGTGCCAGGCATTTTCCCAATCAGTCAGACAAGTGAATATGTTTTTCTTGCAACTCACAAGCAGGTTTTGGTTTATCATCGCAAGACTCAAGTTTGGAAAGAAATGTACACTGTAAAGTATAGCTCAACACTCCCATTATGGTTCTCTGCTCATGCCTATCGCAGCACAATGTTCTCATGCAGCTGA 1083 0.422 MDARGDGIFPDEVVIQILARLPVKPLFRCKIVCKLWYKLSLDKYFIQVYNEVSRKNPMILVEISDSSESKSSLICVDNLRGVSEFSLDFLNDRVKVRASCNGLLCCSSIPDKGVFYVCNPVTREFRLLPKSRERPVTRFYPDGEATLVGLACDPMFQKYNVVLAGCHRTFGHRPDGSFICLVFDSESNKWRKFISFQDDHFTHMNKNQVVYANNALHWLTVSASYILVLDLSCDIWRKMSLPYDLIYGTGNRIYLLDFDGCLSIIQISEAWMSIWVLKDYWKDEWCLVDKVSLRCIRGMVPGIFPISQTSEYVFLATHKQVLVYHRKTQVWKEMYTVKYSSTLPLWFSAHAYRSTMFSCS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1040 360 ProSiteProfiles F-box domain profile. 9 52 IPR001810 GO:0005515
Aev04g1040 360 TIGRFAM F_box_assoc_1: F-box protein interaction domain 99 325 IPR017451 -
Aev04g1040 360 Gene3D - 9 44 - -
Aev04g1040 360 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 7 358 - -
Aev04g1040 360 Pfam F-box-like 10 43 IPR001810 GO:0005515
Aev04g1040 360 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 7 358 - -
Aev04g1040 360 SMART fbox_2 9 49 IPR001810 GO:0005515
Aev04g1040 360 SUPERFAMILY F-box domain 9 81 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1040 Aev-Chr4 6511122 6512204 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1040 - - gmx:100811223 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1040 04 6511122 6512204 Aev04g1040 04 6511122 6512204 ECH