Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0724 ATGGATTATCAGTACATTCTTGGAGGGATCATAGGTTCTACTATTGTGTTTCTGTTTGTTCTGCAGTACAGTTTTGCTGCAAAGAAGAAAGGCACTAAAGGTTCAACAACACTACATGTAGAAAGTGATGGTGGTTATATAAAATCATCAGAGAGTGGAATAAGCTCTGAACCAGTATCAGATGGAGACACTGACATCATCGTTGTTGGTGCTGGTGTTGCTGGTGCTGCCCTTGCTTTCACACTTGGCAAGGATGGAAGACGAGTGCATGTTATTGAAAGGGACCTGAATGAACCAGACAGGATTGTGGGTGAATTGCTTCAACCTGGAGGATATCTTAAGTTACTTGAGTTGGGTCTTGAGGATTGTGTTGATAAAATTGATGCCCAGCAAGTGTTTGGCTATGCACTTTATAAGGATGGGAAGGACACAAGGCTTTCTTATCCATTGGAGAAATTTCACTCTGATGTCTCTGGAAGAAGCTTCCACAATGGCCGTTTCATTCAGAGAATGAGAGTGAAGGCTTCATCTCTTCCAAATGTGAGATTAGAACAAGGAACTGTCACATCTTTACTAGAAGAAAATGGAACTATCAAAGGGGTTAACTACAAAAACAAGAGTGGACAAGAACTTACAGCAAGAGCTCCCCTCACCATAGTTTGTGATGGTTGTTTTTCCAACTTGAGGCGATCTCTTTGCGACCCTAAGGTTGATGTACCATCTTATTTTGTTGGCTTGGTCTTGGAGAATTGTAACCTTCCACATGCCAACCATGGACATGTTATCTTGGGCGATCCTTCCCCCATCTTGTTTTATCAAATCAGTAGCAATGAAATTCGGTGTTTGGTTGATGTGCCTGGCCAAAAACTACCTTCCCTTGGTAACGGAGACATGGCGCGTTATCTGAAAACAGTTGTAGCTCCCCAGGTACCACCAGAGCTGCATGATTCGTTCATAGCAGCAGTGGATAAAGGAAACATAAGAAGCATGCCAAACAGAAGCATGCCTGCATCTCCATATCCAACACCAGGTGCTCTTCTGATGGGAGATGCATTCAATATGCGCCATCCTTTAACAGGAGGCGGAATGACTGTGGCTCTGTCTGACATTGTTCTCCTCAGAAATCTTCTTAGGCCTCTCCGCGATCTTCATGATGCTTCTGCTCTTTGCAAATATCTTGAATCATTCTACACTCTCCGCAAGCCAGTGGCATCTACAATAAACACATTGGCTGGTGCATTATACAAGGTGTTCTGTGCATCCCCTGACCCTGCTAAGAAGGAAATGCGGCAAGCATGTTTTGATTATCTGAGCCTTGGAGGTGTTTTCTCTGATGGACCAATAGCACTGCTTTCTGGTCTAAATCCTCGTCCATTGAGCTTGGTTCTCCATTTCTTCGCCGTTGCTGTCTACGGCGTCGGTCGCTTGCTGATACCGTTCCCTTCTCCAAAACGCATGTGGATTGGCTATAGATTGATTGCTGGAGCATCTGGTATCATATTCCCAATTATCAAGGCTGAGGGAGTAAGACAAATGTTCTTCCCGGTGACTGTGCCAGCATATTACAGAGCACCTCCTTCCAATGAGCATGAATGA 1596 0.443 MDYQYILGGIIGSTIVFLFVLQYSFAAKKKGTKGSTTLHVESDGGYIKSSESGISSEPVSDGDTDIIVVGAGVAGAALAFTLGKDGRRVHVIERDLNEPDRIVGELLQPGGYLKLLELGLEDCVDKIDAQQVFGYALYKDGKDTRLSYPLEKFHSDVSGRSFHNGRFIQRMRVKASSLPNVRLEQGTVTSLLEENGTIKGVNYKNKSGQELTARAPLTIVCDGCFSNLRRSLCDPKVDVPSYFVGLVLENCNLPHANHGHVILGDPSPILFYQISSNEIRCLVDVPGQKLPSLGNGDMARYLKTVVAPQVPPELHDSFIAAVDKGNIRSMPNRSMPASPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVLLRNLLRPLRDLHDASALCKYLESFYTLRKPVASTINTLAGALYKVFCASPDPAKKEMRQACFDYLSLGGVFSDGPIALLSGLNPRPLSLVLHFFAVAVYGVGRLLIPFPSPKRMWIGYRLIAGASGIIFPIIKAEGVRQMFFPVTVPAYYRAPPSNEHE* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0724 531 Gene3D - 59 445 IPR036188 -
Aev04g0724 531 Pfam NAD(P)-binding Rossmann-like domain 68 94 - -
Aev04g0724 531 Pfam Squalene epoxidase 215 487 IPR013698 GO:0004506|GO:0016021|GO:0050660
Aev04g0724 531 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 214 229 - -
Aev04g0724 531 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 342 357 - -
Aev04g0724 531 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 65 87 - -
Aev04g0724 531 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 357 373 - -
Aev04g0724 531 SUPERFAMILY FAD/NAD(P)-binding domain 63 439 IPR036188 -
Aev04g0724 531 PANTHER SQUALENE MONOOXYGENASE 1 528 IPR040125 GO:0004506|GO:0016126
Aev04g0724 531 PANTHER SQUALENE MONOOXYGENASE-RELATED 1 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0724 Aev-Chr4 4457057 4460442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0724 19 527 Miscellaneous Gene Families AT1G58440 76.517 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0724 K00511 - gmx:100796946 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0724 04 4457057 4460442 Aev04g0724 04 4457057 4460442 ECH
Aev03g2102 03 23583334 23586487 Aev04g0724 04 4457057 4460442 PCT