Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0354 ATGTCTTCTCACCCCTCATCCAAACGCGCCTTAGCTTCTTCTTCTTCGTCTTCTTCTTCAGCATCAGCTAGTGACACCAAAAGCAACAACACCGCGTCTATGAAAAAAGCCAAGTCGCAGGGCGTCGCGTGCACTTTCGACTCTTCTTCAAACTCCAAACACGCCCTTCACCTTAACTCAGACGACGACGTCGTTTTGGACCCTTCTTCCCTCCCCATGGCCCTCGACGACGATCTCAAATCCCACAACGACCCCAACGCGCGCGGCGCCGCCGCCACCTCCGTCGCCGCCAATCTCTCCCGTAAGAAAGCCACGCCGCCTCAACCCGCTAAGAAGCTCCTCATCAAGCTCCACAAAGGTAAACCAACACTGCCCCCAAATTTTGAGGAGGATACGTGGGCAAAATTGAAGTCTGCTATTTGTGCTATATTCTTGAAGCAACCTAATTCTTGTGACTTGGAGAAACTTTATCAGGCTGTGAATGATCTTTGCATTTATAAAATGGGTGGAAATCTTTATCAACGGATAGAAAAGGAGTGTGAAGCACACATATCTGCAGCATTGCAGTCTTTGGTTGGCCAAAGTCCAGATTTGGTTGTTTTTCTATCTCTAGTTGAGAGATGTTGGCAGGATCTTTGTGACCAAATGTTGATGATTCGTGGTATAGCCTTGTACCTGGATAGGACATATGTGAAGCAAACAACAAATGTACGATCATTATGGGACATGGGCTTACAACTTTTCCGCAAACATCTTTCACTATCTCCTGAAGTAGAACACAAAACTGTTACTGGTCTTCTACGAATGATTGAAAGTGAAAGATTAGGTGAAGCAGTGGATAGAACCCTTCTAAACCATCTTTTAAAGATGTTTACTGCACTTGGAATTTATGTAGAAAGCTTTGAGAAGCCGTTCCTTGAGTGCACATCTGAATTTTATGCTGCTGAAGGTATGAAATACATGCAGCAATCAGATGTTCCAGATTATTTGAAACATGTGGAGACTAGATTGCAAGAGGAACATGAGAGATGTTTGATCTACTTGGATGCAAGTACTAAGAAGCCATTGATAGCAACTGCAGAAAAGCAACTTCTTGAACGTCATATACCTGCCATTCTTGATAAGGGTTTCTCTATGCTTATGGATGGAAATCGTATTGAAGACCTTCAGAGACTGTACTCACTATTTTTAAGGGTCAATGCCCTTGAGTCTCTAAAGCAGGCCCTTAGTTCATACATCAGGAGAACTGGGCAGGGTATTGTTATGGATGAGGAGAAAGATAAAGACATGGTTTCATCTCTATTGGAATTTAAGGCTTCTCTTGACAGAATATGGGAAGAAAGTTTTTTCAAGAATGAAGCATTTTCTAACACCATTAAAGATTCATTTGAGCATCTTATCAATCTACGACAGAACCGACCTGCAGAGTTGATTGCAAAGTTTTTAGATGAGAAGCTCCGTGCAGGTAATAAGGGTACTTCTGAAGAGGAATTGGAGGGTACACTTGATAAAGTTCTGGTTTTGTTCAGGTTCATTCAGGGCAAGGATGTGTTTGAAGCATTCTATAAGAAAGATCTTGCAAAAAGACTGCTTTTAGGAAAAAGTGCTTCAATTGATGCAGAGAAATCTATGATATCCAAGTTGAAGACCGAGTGTGGCAGCCAGTTCACAAACAAACTGGAAGGAATGTTTAAGGACATTGAATTATCAAAAGAAATAAATGAGTCCTTCAAACAGTCATCCCAAGCACGGACAAAACTCCCATCAGGGATTGAAATGAGTGTTCATGTTCTGACAACTGGGTACTGGCCAACCTATCCACCCATGGATGTTAGACTTCCTCATGAATTGAACGTTTACCAGGATATTTTCAAAGAGTTCTATTTGAGCAAATATAATGGAAGGCGTCTGATGTGGCAAAATTCATTAGGTCACTGTGTCTTAAAGGCAGAGTTTCCTAAAGGGAAAAAGGAGTTGGCTGTCTCCCTATTTCAGACTGTTGTTCTGATGCTGTTCAATGATGCTGAGAAACTAAGCTTTCAAGATATCAAGGACTCTACAAGTATTGAGGACAAGGAACTGAGAAGGACTCTGCAATCACTTGCATGTGGAAAAGTTCGTGTCCTGCAAAAGTTGCCAAAGGGTAGAGATGTGGAGGATGATGACTCATTTGTTTTCAATGAAGGGTTTACAGCTCCTCTTTACCGTATAAAGGTAAATGCAATTCAGCTGAAGGAGACAGTGGAGGAGAACACTAGCACCACTGAGAGAGTTTTCCAAGACCGTCAGTATCAGGTTGATGCTGCTATTGTGAGGATAATGAAGACTAGGAAAGTGCTTAGTCACACCCTTTTAATTACCGAACTCTTTCAACAGCTGAAATTTCCAATAAAACCTGCTGATTTGAAGAAAAGGATTGAAAGCCTGATAGATAGAGAATATCTGGAGAGGGACAAGAACAACCCACAAATATACAATTACTTGGCATAG 2490 0.4185 MSSHPSSKRALASSSSSSSSASASDTKSNNTASMKKAKSQGVACTFDSSSNSKHALHLNSDDDVVLDPSSLPMALDDDLKSHNDPNARGAAATSVAANLSRKKATPPQPAKKLLIKLHKGKPTLPPNFEEDTWAKLKSAICAIFLKQPNSCDLEKLYQAVNDLCIYKMGGNLYQRIEKECEAHISAALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTTNVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALGIYVESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVETRLQEEHERCLIYLDASTKKPLIATAEKQLLERHIPAILDKGFSMLMDGNRIEDLQRLYSLFLRVNALESLKQALSSYIRRTGQGIVMDEEKDKDMVSSLLEFKASLDRIWEESFFKNEAFSNTIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYNGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTSIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQLKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0354 829 Pfam Cullin family 133 730 IPR001373 GO:0006511|GO:0031625
Aev04g0354 829 Gene3D Cullin Repeats 472 583 - -
Aev04g0354 829 SUPERFAMILY "Winged helix" DNA-binding domain 741 829 IPR036390 -
Aev04g0354 829 PANTHER CULLIN-4A 88 829 - -
Aev04g0354 829 Gene3D Cullin; Chain C, Domain 2 588 743 - -
Aev04g0354 829 SUPERFAMILY Cullin homology domain 470 740 IPR036317 -
Aev04g0354 829 Gene3D Cullin Repeats 120 251 - -
Aev04g0354 829 Pfam Cullin protein neddylation domain 761 821 IPR019559 -
Aev04g0354 829 SMART cul_2 503 652 IPR016158 -
Aev04g0354 829 Gene3D - 756 829 IPR036388 -
Aev04g0354 829 MobiDBLite consensus disorder prediction 75 103 - -
Aev04g0354 829 MobiDBLite consensus disorder prediction 1 50 - -
Aev04g0354 829 Gene3D Cullin Repeats 370 471 - -
Aev04g0354 829 SUPERFAMILY Cullin repeat-like 126 469 IPR016159 -
Aev04g0354 829 SMART Cullin_Nedd8_2 758 823 IPR019559 -
Aev04g0354 829 Gene3D Cullin Repeats 255 368 - -
Aev04g0354 829 ProSitePatterns Cullin family signature. 802 829 IPR016157 GO:0006511|GO:0031461|GO:0031625
Aev04g0354 829 PANTHER CULLIN 88 829 IPR045093 -
Aev04g0354 829 ProSiteProfiles Cullin family profile. 473 702 IPR016158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0354 Aev-Chr4 2245698 2252673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0354 K10609 - zju:107405589 1429.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0354 04 2245698 2252673 Aev04g0354 04 2245698 2252673 ECH
Aev04g0354 04 2245698 2252673 Aev01g2963 01 31410888 31416864 PCT