Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3179 ATGCTGGAAACCGTTAAATACCTGATCGGGTCGGCGGGTCCAAGCGGGTTCGGGTCAAAATCGACCGCCGAACAAGTCACCGAAACCACCGATCTCCGCTCCCTCACCGCCATAATCACCGGTGCTACGTCTGGAATAGGAGCAGAAACGGCAAGGGTGTTGGCGAAGAGAGGAGCGAGGCTTGTTCTGCCAGCACGGAGCCTGAAAGCTGCGGAAGATGTAAAAGCGCGCATAGTGTCGGAGTTCCCCGACTCTGAGATTATACTCATGCCGCTTGATCTCTCCTCTCTCTCTTCCGTTAGGAACTTCGTTTCTCACTTTCACTCCCTCCGTTTACCGCTCAATCTCCTCATAAACAACGCTGGAAAGTTTGCACATGACCACGCGATCTCCGAGGATGGAGTTGAAATGACCTTCGCTACTAATTATCTAGGTCACTTTCTGTTAACAAAGCTGTTGGTGAAGACGATGGTTGAAACGGCAGAGCAGACAGGGGTACAAGGCAGGATCGTGAACGTGTCGTCCGGTATCCACGGTTGGTTTTCCGGTGATCTCATGTCATATCTCGCTTCTATAAGCCGCAACAAATGTCATTACGACGCCACACGTGCTTATGCTCTTTCCAAGCTCGCCAACGTTTTACACACCAAGGACCTTGCTCGCAGACTCCAGGAAATGGGGGCGAACGTGACTGTGAACTGTGTTCATCCAGGGATCGTGAGAACCAGACTCACAAGAGAGCGTGAAGGCTTGCTCACAGATTTGGTGTTCTTTTTGGCTTCCAAGCTCTTAAAGACGATTCCTCAGGCAGCAGCAACAACATGCTATGTGGCGACCCACCAAAAGGTGTACAATATTTCTGGAAAGTACTTTTCTGACTGCAACGAAGCCTTCACCTCAAAATTGGGATCCAACTCAACCGAAGCAACTAGGTTATGGGCCGCTTCCGAATTCATCATTTCTACGGCTCCTAAACCTGCCTTTGACCTACTCAACCACCTTTGA 1005 0.5035 MLETVKYLIGSAGPSGFGSKSTAEQVTETTDLRSLTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEDVKARIVSEFPDSEIILMPLDLSSLSSVRNFVSHFHSLRLPLNLLINNAGKFAHDHAISEDGVEMTFATNYLGHFLLTKLLVKTMVETAEQTGVQGRIVNVSSGIHGWFSGDLMSYLASISRNKCHYDATRAYALSKLANVLHTKDLARRLQEMGANVTVNCVHPGIVRTRLTREREGLLTDLVFFLASKLLKTIPQAAATTCYVATHQKVYNISGKYFSDCNEAFTSKLGSNSTEATRLWAASEFIISTAPKPAFDLLNHL* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3179 334 CDD retinol-DH_like_SDR_c_like 36 313 - -
Aev03g3179 334 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 30 294 IPR036291 -
Aev03g3179 334 PANTHER MITOCHONDRIAL PYRUVATE CARRIER 4 325 - -
Aev03g3179 334 PANTHER RETINOL DEHYDROGENASE 4 325 - -
Aev03g3179 334 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 123 IPR002347 -
Aev03g3179 334 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 176 IPR002347 -
Aev03g3179 334 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 205 224 IPR002347 -
Aev03g3179 334 Pfam short chain dehydrogenase 36 248 IPR002347 -
Aev03g3179 334 Gene3D - 21 323 - -
Aev03g3179 334 PRINTS Glucose/ribitol dehydrogenase family signature 228 245 IPR002347 -
Aev03g3179 334 PRINTS Glucose/ribitol dehydrogenase family signature 112 123 IPR002347 -
Aev03g3179 334 PRINTS Glucose/ribitol dehydrogenase family signature 205 224 IPR002347 -
Aev03g3179 334 PRINTS Glucose/ribitol dehydrogenase family signature 162 178 IPR002347 -
Aev03g3179 334 PRINTS Glucose/ribitol dehydrogenase family signature 36 53 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3179 Aev-Chr3 30182792 30184884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3179 17 246 Acyl Lipid Metabolism Gene Families AT3G46170 26.050 2.54e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3179 - - gmx:100794347 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3179 03 30182792 30184884 Aev03g3179 03 30182792 30184884 ECH