Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3173 ATGATCGCATCCCAATCAACTGCACATTTCTCACCTTCCTTCCCCTCCTCAACTCGCTTCGATTCCACTCGCCCAACTCGCTTCCTTTCCGTCACCTTCCCTATCAACCGAACCCGCTCTCTACCTCGTCGGCGACTCGCCGTCTCTTCCCGTTTCAACTCCTCCAAATCCTCCGGCGCCGGTGGCTTCGTCTCGCCGGGAAACGGAGATGTGCCGTACGAGCTCCAACACGACTTCTCCCCTCAGCGCGATAGGAATGGATCGCCGGTGTACGTCACGCTTCCGGTGAATTCTGTGGGCTCCGAGGGGAGGATTTGGAGGCCGAAAGCGATGATGTTCTCGCTGAAGGCGCTTGCTGCTGCTGGCGTTGAAGGCGTGGTGGTGGAGATATGGTGGGGAATCGTTGAGAGGAACCAGCCTAGGGTTTACGATTGGCGAGGGTATCGTGAGCTCGTGATGATGGCTTGCATGTGTGGCCTCAAGGTTCGAGCTGTTCTTGCGTTCCATCAGTTCGGAACAGGACCTGATGATCCCAATTGGATACCACTTCCTCTATGGGTGCTTGATGAGATCCATAAAGATCCAGAGTTAGCATATTCTGACCGGTTTGGAAGGAGAAGTTTTGAATACGTTTCCCTTGGATGTGATATTCTTCCTGTGCTTCGTGGACGCTCTCCTCTTCAAGCATATGCAGATTTTATGAGGGACTTCAGGGACATTTTCAGGCCATCGCTTGGTGTTATCATTACAGGTGTACAGATAGGCATGGGTCCTGGTGGTGAACTAAGATATCCGTCATTCTCTTTCCAGAAGCCAAATTTGGCTCGGCCTGATGAACTTGGCGAGTTTCAGTGTTATGATAAGTATATGCTTGCTTCCCTAAATGCGTGCGCAAGAAAGATTGGAAAGCGTGAATGGGGTAATGGTGGTCCAATTGGGACTGGAAGTTTGATACAAAATCCTGAGCGTACTGATTTTTTTAGAAATGAAGGTGGCTCTTGGAACACATCATATGGTAAGTTTTTCCTCGAATGGTACTCAGATATGCTGCTGCTGCATGGAGAGAGAATTTGTAGGGAAGCTGAAACTATATTTAGGGGCGCAGAAGTCCATATATCAGCTAAAGTGGCTGCTATTCACTGGCACTTTGTCACACAATCCCATCCATCAGAGTTAACTGCAGGGTATTATAATACTTTTGAGAGGGATGGATACTTACCCATTGCTCGCATGTTTAGTAAGTACGGATTGACAATGTGCTGCTCTTGTTTTGAAATGCAAGATGCATTTATGAAGAAGATAAATCCAGATGGTAGCCCTGAAGGTTTTCTTAGGCAGCTTTTGCTGGCTGCTAGGCTTTGTGACATATCACTTGAAGGTCAAAATTTTTCAACTGATTTGGATGATGATGCATTCACCCAAGTGCTGAAGATGTCGAAGTTTTTCTCGAATGGGATTGAAAGGCGCCCCTTCTCATTCAACTTTGTTAGAATGGATAAAAAAATGTTTGAACCCCGAAATTGGGATCGATTTACTCGATTTGTGAGGCAAATGTCTGACGGAAACATTTTTCGAGCCAGGTTAAAATCTGCAGGTGACATACGATTGAAGACCACCCCAGGGGCTATTGAAGTAGGACTATTGTATCAGCACTCTTGA 1659 0.4714 MIASQSTAHFSPSFPSSTRFDSTRPTRFLSVTFPINRTRSLPRRRLAVSSRFNSSKSSGAGGFVSPGNGDVPYELQHDFSPQRDRNGSPVYVTLPVNSVGSEGRIWRPKAMMFSLKALAAAGVEGVVVEIWWGIVERNQPRVYDWRGYRELVMMACMCGLKVRAVLAFHQFGTGPDDPNWIPLPLWVLDEIHKDPELAYSDRFGRRSFEYVSLGCDILPVLRGRSPLQAYADFMRDFRDIFRPSLGVIITGVQIGMGPGGELRYPSFSFQKPNLARPDELGEFQCYDKYMLASLNACARKIGKREWGNGGPIGTGSLIQNPERTDFFRNEGGSWNTSYGKFFLEWYSDMLLLHGERICREAETIFRGAEVHISAKVAAIHWHFVTQSHPSELTAGYYNTFERDGYLPIARMFSKYGLTMCCSCFEMQDAFMKKINPDGSPEGFLRQLLLAARLCDISLEGQNFSTDLDDDAFTQVLKMSKFFSNGIERRPFSFNFVRMDKKMFEPRNWDRFTRFVRQMSDGNIFRARLKSAGDIRLKTTPGAIEVGLLYQHS* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3173 552 Pfam Glycosyl hydrolase family 14 91 514 IPR001554 GO:0000272|GO:0016161
Aev03g3173 552 PANTHER BETA-AMYLASE 5 534 - -
Aev03g3173 552 SUPERFAMILY (Trans)glycosidases 86 537 IPR017853 -
Aev03g3173 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 122 136 IPR001554 GO:0000272|GO:0016161
Aev03g3173 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 143 161 IPR001554 GO:0000272|GO:0016161
Aev03g3173 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 257 279 IPR001554 GO:0000272|GO:0016161
Aev03g3173 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 165 186 IPR001554 GO:0000272|GO:0016161
Aev03g3173 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 405 428 IPR001554 GO:0000272|GO:0016161
Aev03g3173 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 387 398 IPR001554 GO:0000272|GO:0016161
Aev03g3173 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 334 353 IPR001554 GO:0000272|GO:0016161
Aev03g3173 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 370 386 IPR001554 GO:0000272|GO:0016161
Aev03g3173 552 MobiDBLite consensus disorder prediction 1 22 - -
Aev03g3173 552 PANTHER - 5 534 IPR001554 GO:0000272|GO:0016161
Aev03g3173 552 Gene3D Glycosidases 80 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3173 Aev-Chr3 30145889 30148492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3173 63 521 Glycoside Hydrolase AT4G17090 46.970 2.16e-149 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3173 K01177 - gmx:100805981 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3173 03 30145889 30148492 Aev03g3173 03 30145889 30148492 ECH