Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3171 ATGCCGGGCCTCGTATCGGTAAAAACCCCACCGGACGCAGCCCCGCTCCGAATATCCGTACCCAACACTCCGACCCAAAGATCCGAATCCGGAGCCAACATCCGAACCCCATCCCCTCTCCCTAAGAAGCCACCGTCACCTTCCCCCTCCCGATCCAAGAAGAAGACCCCCGAAACCCCAACCTCCAACCCCGTCCTCTCCGAAGCCTCACTCGACAACCCCGATCTCGGCCCCTTCCTTCTTAAGTTAGCCCGCGACACCATCGCTTCCGGCGACGGGCCTGCCAAGGCCCTTGACTATGCTATCCGGGCCTCAAAGTCGTTTGAGCGATGTGCTGTCGAGGGCGAGCCCAGCCTCGACCTTGCCATGAGCCTGCACGTCCTCGCTGCTATTTACTGCAGCTTGGGGAGGTTCGAGGAGGCCGTGCCGGTTCTGGAGCGCGCGATCCAGGTTCCTGATGTGTCGAGAGGCGCGGATCACGCGCTCGCTGCTTTCTCAGGGTATATGCAGTTAGGTGATACGTTCTCCATGCTTGGACAGGTGGATAAGTCCATCGCTTCGTACGACCAGGGACTCCAGATTCAGATCCAGGCCTTGGGTGAAACCGATCCCAGGGTTGGAGAAACTTGCAGATACTTGGCGGAGGCCAATGTTCAAGCGATGCAGTTTGACAAAGCAGAGGAGCTGTGCAAGAGGACTCTTGAAATTCACCGCGCACACAGTGAACCAGCTTCTCTTGAAGAGGCAGCTGATAGAAGGCTTATGGCCCTTATATGCGAGGCCAAGGGGGATTATGAAGGGGCTCTTGAGCACCTTGTCCTTGCCAGCATGGCGATGATTGCAAATGGACAGGACAACGAAGTTGCTTCTATTGATGTCAGCATTGGAAACATTTACATGTCTCTCTGTCGCTTTGACGAAGCTATCTTCTCGTACCAGAAGGCACTTACTGTCTTCAAGGCAGCCAAGGGAGAAAACCATCCTTCCGTTGCATCTGTCTTTGTCCGACTTGCTGATTTGTATCACAGGACTGGAAAGCTTCGCGAGTCCAAGTCCTATTGTGAAAATGCTCTGAGAATATACTCAAAACCAGTTCCTGGAACCACGGCAGAAGAGATTGCTGGTGGCTTAACAGAAGTTTCAGCCATTTTTGAATCTGTGGATGAGCCTGATGAGGCACTGAAGCTCTTACAGAAGGCAATGAAATTGTTGGAGGATAAACCAGGACAGCAGAGCACGATTGCAGGAATAGAAGCGCGGATGGGAGTGATGTATTACATGATTGGGAGGTACGAAGAAGCAAGGAACTCTTTTGAGAGCGCCGTAGCAAAACTCAGAGCCAGCGGAGAAAGGAAGTCTGCCTTCTTTGGAGTTGTTTTGAACCAGATGGGGTTGGCATGCGTGCAGCTGTTTAAGATAGATGAGGCCGCGGAATTATTCGAAGAAGCTAGGGGAATTCTTGAACAGGAGTGTGGCCCATGTCATCAAGATACTCTCGGAGTATACAGCAATCTTGCAGCAACTTATGATGCTATGGGAAGAGTGGGGGATGCAATTGAGATCTTAGAGTATGTCCTCAAATTGAGGGAGGAGAAGCTTGGAATAGCGAATCCTGATTTCGAGGACGAGAAGCGTAGGCTGGCTGAGCTCCTGAAAGAAGCAGGCAAGACGCGAGATAGAAAAGCGAAATCTCTGGAAAACCTCATCGATCCAAACTCAAAGAGGACAAAGAAGGAGGGTGCAAAGAGATGGCCTGGTTTGGGTTTTAGAATTTAA 1776 0.5175 MPGLVSVKTPPDAAPLRISVPNTPTQRSESGANIRTPSPLPKKPPSPSPSRSKKKTPETPTSNPVLSEASLDNPDLGPFLLKLARDTIASGDGPAKALDYAIRASKSFERCAVEGEPSLDLAMSLHVLAAIYCSLGRFEEAVPVLERAIQVPDVSRGADHALAAFSGYMQLGDTFSMLGQVDKSIASYDQGLQIQIQALGETDPRVGETCRYLAEANVQAMQFDKAEELCKRTLEIHRAHSEPASLEEAADRRLMALICEAKGDYEGALEHLVLASMAMIANGQDNEVASIDVSIGNIYMSLCRFDEAIFSYQKALTVFKAAKGENHPSVASVFVRLADLYHRTGKLRESKSYCENALRIYSKPVPGTTAEEIAGGLTEVSAIFESVDEPDEALKLLQKAMKLLEDKPGQQSTIAGIEARMGVMYYMIGRYEEARNSFESAVAKLRASGERKSAFFGVVLNQMGLACVQLFKIDEAAELFEEARGILEQECGPCHQDTLGVYSNLAATYDAMGRVGDAIEILEYVLKLREEKLGIANPDFEDEKRRLAELLKEAGKTRDRKAKSLENLIDPNSKRTKKEGAKRWPGLGFRI* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3171 591 MobiDBLite consensus disorder prediction 556 585 - -
Aev03g3171 591 Gene3D Tetratricopeptide repeat domain 167 275 IPR011990 GO:0005515
Aev03g3171 591 SUPERFAMILY TPR-like 122 443 IPR011990 GO:0005515
Aev03g3171 591 Coils Coil 540 560 - -
Aev03g3171 591 SUPERFAMILY TPR-like 416 557 IPR011990 GO:0005515
Aev03g3171 591 MobiDBLite consensus disorder prediction 19 35 - -
Aev03g3171 591 Gene3D Tetratricopeptide repeat domain 276 456 IPR011990 GO:0005515
Aev03g3171 591 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 590 - -
Aev03g3171 591 MobiDBLite consensus disorder prediction 52 69 - -
Aev03g3171 591 MobiDBLite consensus disorder prediction 556 591 - -
Aev03g3171 591 ProSiteProfiles TPR repeat profile. 289 322 IPR019734 GO:0005515
Aev03g3171 591 Pfam MalT-like TPR region 126 275 IPR041617 -
Aev03g3171 591 Pfam Tetratricopeptide repeat 288 362 - -
Aev03g3171 591 Pfam Tetratricopeptide repeat 459 531 - -
Aev03g3171 591 Gene3D Tetratricopeptide repeat domain 457 577 IPR011990 GO:0005515
Aev03g3171 591 Gene3D Tetratricopeptide repeat domain 69 166 IPR011990 GO:0005515
Aev03g3171 591 SMART tpr_5 289 322 IPR019734 GO:0005515
Aev03g3171 591 SMART tpr_5 457 490 IPR019734 GO:0005515
Aev03g3171 591 SMART tpr_5 165 198 IPR019734 GO:0005515
Aev03g3171 591 SMART tpr_5 331 364 IPR019734 GO:0005515
Aev03g3171 591 SMART tpr_5 249 282 IPR019734 GO:0005515
Aev03g3171 591 SMART tpr_5 374 407 IPR019734 GO:0005515
Aev03g3171 591 SMART tpr_5 499 532 IPR019734 GO:0005515
Aev03g3171 591 SMART tpr_5 207 240 IPR019734 GO:0005515
Aev03g3171 591 SMART tpr_5 415 448 IPR019734 GO:0005515
Aev03g3171 591 SMART tpr_5 122 155 IPR019734 GO:0005515
Aev03g3171 591 MobiDBLite consensus disorder prediction 1 71 - -
Aev03g3171 591 PANTHER - 1 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3171 Aev-Chr3 30136026 30138556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3171 - - gmx:100815100 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3171 03 30136026 30138556 Aev03g3171 03 30136026 30138556 ECH