Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3157 ATGGGGTGTTGCTGCACCAAACAAGACCGGCTTATGATGAATGAACAAGATCTTGCTGCAGTTCTTGCTGCTCAAACCTGTTTTAGTGTTTGTGAGATTGAAGCAGTGCATGAGCTGTTCAAGAAATTAAGCAGCTCCATTGTTGATGACGGGCTTATCAGCAAAGAGGAATTTCAGCTTGGCTTATTTGGAAGCAGTAAGAAAAGAAGCCTCTTTGCCGACAGAGTATTTAAGTTATTTGACAGAAACAATGATGGAGTGATAGAATTTGGAGAGTTTGTTAGAGGCCTAAGCGTGTTCCATCCAGCAGCGCCCCAACCACAAAAAGCAGCTTTTGTATTTGGACTGTATGATATATGGGAAAGAAGGTATATAGAACGACAAGAGGTAAGAGAGATGATCCTGGCACTACTAACCGAGTCCCATTTGGTTCTTTCTGATGACATCATTAAGCTCATTCTTGATAAGGCCTTTGAAGAAGCAGATTCCAAAGGAGATGGAAAGATTGATCAAGAGGAGTGGCAAGAATTTGTGGCTCGAAATCCATCCCTGCTCAGGAATATGACAATTCCATATTTGAAGGACCTCAATACTCAGTTTCCTAATTTTGAACTAAGATCGGACATTGAAGATGACATAAGAAGCAGCAGCAGCATCCAGTGA 663 0.4163 MGCCCTKQDRLMMNEQDLAAVLAAQTCFSVCEIEAVHELFKKLSSSIVDDGLISKEEFQLGLFGSSKKRSLFADRVFKLFDRNNDGVIEFGEFVRGLSVFHPAAPQPQKAAFVFGLYDIWERRYIERQEVREMILALLTESHLVLSDDIIKLILDKAFEEADSKGDGKIDQEEWQEFVARNPSLLRNMTIPYLKDLNTQFPNFELRSDIEDDIRSSSSIQ* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3157 220 ProSitePatterns EF-hand calcium-binding domain. 81 93 IPR018247 -
Aev03g3157 220 SMART efh_1 72 100 IPR002048 GO:0005509
Aev03g3157 220 SMART efh_1 153 181 IPR002048 GO:0005509
Aev03g3157 220 SUPERFAMILY EF-hand 22 200 IPR011992 -
Aev03g3157 220 ProSiteProfiles EF-hand calcium-binding domain profile. 149 184 IPR002048 GO:0005509
Aev03g3157 220 PANTHER CALCINEURIN B 1 210 IPR045198 GO:0005509|GO:0019722|GO:0019900
Aev03g3157 220 ProSiteProfiles EF-hand calcium-binding domain profile. 68 103 IPR002048 GO:0005509
Aev03g3157 220 Pfam EF hand 154 179 IPR002048 GO:0005509
Aev03g3157 220 Pfam EF hand 74 98 IPR002048 GO:0005509
Aev03g3157 220 PANTHER CALCINEURIN B-LIKE PROTEIN 5 1 210 - -
Aev03g3157 220 Gene3D - 19 212 - -
Aev03g3157 220 PRINTS Recoverin family signature 123 141 - -
Aev03g3157 220 PRINTS Recoverin family signature 76 97 - -
Aev03g3157 220 PRINTS Recoverin family signature 169 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3157 Aev-Chr3 30061691 30063117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3157 21 211 EF-hand Containing Proteins AT5G55990 59.162 1.11e-79 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3157 K06268 - vra:106766823 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3157 03 30061691 30063117 Aev03g3157 03 30061691 30063117 ECH