Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3105 ATGAAGTGCCGATCCGTAGCGTGCATATGGTCAGGCACGCCCTTCCCTCACAGAGTCACCGCCGTCGCCGCCTTCACCCAACCTCCTTCCCTCTTCACCGCCGGATCCGACGGCTCCATCCTCTGGTGGTCCCTTTCCCCGCAACTCAAAGCGGTGGCCATTTTGTGCGGTCACGCAGCTCCCATAACCGATCTTAGTACTTGTAGTCCCGTTTCCGCGGAAGAAGAAGAGGAAGAATCCTATGATGGCGGTTCGAGTAGTTTAGTGGTGAATTCTAGTTCAAGTAGTTGTAGTGCATTGATTAGCGCTTGTTCTGATGGGTTCTTATGTGTGTGGAGTAGAAGCAGTGGCCATTGCCGTTGCAGGAGGAAATTGCCACCTTGGGTGGGAACCCCACGCATTATTCGAGCTTTGCCTTCGAGGCCGAGATATGTGTGCATTGCTTGTTCTTTCATGGAACATTCTGGAAGTCCCGGAGAGGGGAACGAAGTGTTGGTGGATGGAGAAACAACTCTGCACAGGAAGCCCCCTAAATGTAGTCTTGTTATTGTGGACACTTACTCGCTTTCGATTACTCATAATGTGTTTCATGGAAATTTATCCATTGGTCCAATCAGGTTTATGGAATTAGTGTTAGCTGATAGTGATGAAAGGGGGCATTCTGTGCTTGTGGCTGATTCTGCTGGTAAGCAACAGATAGTTTCGATATCAAAGGACCCTCTTGATCGTGGGGAAAGCTTGATGAGTTCACCAAGAGATACTTCTCAGTTGGAGAGTTCTTTTTTCTCTGAGGGATTAAGCGGTGTGGATCTAGTTGTTTCAGTTTTGAGTTATGGGAGCATTGTTGCTTTTATATTGAAAGATAGCTGCATATTTAGGTTGTTGTCTAGTGATACTGCAATTGGAGAGGTTTCTTTTGAAGGCAGTCTGTTGTGTTTGAATGGGGATTCTTCTCAAGCACATGTTTTAGGTGGCATTTTTCTTGAAAGCGATGATGTGAGAAATATGCCCAATGCCCACGAATGCAACAATTTGACTCTAGTGTATTTTGTTGTGTGGAATGATATAGGCGCTGCAATTGTCTATAAATTATCATATCAGAATGATGTATTTAGATGCGAGCCACATTCTGAGATTCCCGCTACTCATTACCAGCCTGATATGAGATCATCTGTTTCTTTTCTACAAGTAAATCATTATCTTGTCTGCATAAAGTCAATTTGCTTTCATTATGAGGAACCTTTGCTATGGAGACCGCACATAACGATCTGGTCACTGCATGACTTTGATGATAGACCTGGTAAATTGTATCTTCAATGCAGGATGATCAGTGATGGTGTATCTTTTGCTGACTGGAGTGGGAAGTCCACTCACCCTGGAGGATGTGATGGTTTAGAGACAAATTCAACTTTGGTGGCAACTGCAGCTTCAGAAGATATAAGCAACATACATACTGATAGCATAAATAATTACTATGCTAACAAGGGACGGATAGTTTCTTCTTCCATGATTATCTCTGAGAACCTCCTTACTCCTTATGCTGTTGTATATGGTTTTTTATGTGGAGAAATAGAGCTTCTTAAGTTTGACATGTTTCAAGGGATTTACTTTGATGAGTCTAGTTCCAATCCCGATGAGAAGTCAACTGCTTGCAGACAGTACTTTTCAGGACACACTGGTGCTGTACTTTGTTTGGCAGCTCATCTAATGATGGGTAATGCCAAAGGCCAGAATCTCAAACGGGTTTTGGTTTCTGGAAGTATGGATTGCACAATTCGTATATGGGATCTTGACAGCAACTCTGCTGTTATGGTAATGCATCATCATGTGGCTCCAGTGCGTCAAATTATTCTGCCCCCATCTTCGACTGGACATCCTTGGAGTGACTGCTTCCTTTCGGTTGGAGAGGATGCATGTGTTGCTCTTGTTTCTCTTGAGACTCTGAGGGTGGAGAGAATGTTTCCTGGACACATCAACTATCCATCGAAAGTTGTATGGGATGGAGCAAGAGGTTATATTGCCTGCCTCTGCCAAACACATTGTGGAACTTCTGATGCTAGCAATGTGTTATACATTTGGGATGCAAAAACAGGTTCCCGCGAGCGAGTCCTGCGTGGGACCGCTGCACATTCAATGTTTGAGCATTTTTGTAAAAGCATTAGCATGAATTCCATATCTGGCACATTGCTAAATGGAAATACATCGGTTTCTTCGTTACTTCTTCCCATAGTTGATGATGCAAGGCTCTCTAACACCTTACTAAGTCCGTCAGAGAACTCACTTACTTCATCGAAGTCATCACCAAATATTTCAAACATGACTGAGATGAGTTCTTCCAAAAGAAATGCAGGTAAAGGAAATTTAGCAAAGCCAACTTCTTCCCCCCTGTTTAGTCTCTGGAGTAAAAAGCTTCCTGTCAAATGCTCGTGCCCATTTCCTGGGGTTGTGTCTCTGAGTTTTGATCTTGCATCATTGATGTTCTCTTATAAAAGGAATGAGGCCGTGCAAAATGGCAGTGTTGAGTCAGTGAATATCAATTCGAAGCAGCAGGGAGCTCAGGAGCAAAATCCTGAATCATTTGAGGGGCATGGCTTGTTCAACCTTTTTGAAGAATACTTACTTCGATATAGCTTGTCATTTTTACATTTGTGGAGTGTGGACAGTGAGCTTGATAACTTGCTGATGAGTGACATGAAGCTGAGCAAACCTGATAATTTTATAGTAGCTTCAGGTCTACCGGGGGATAAAGGATCGTTGACGTTGACATTTCCTGGCCTGAGTGCTACTCTTGAGCTCTGGAAATCATCTTCTGAGTTTTGTGCAATGAGGTCATTGACAATGGTATCCCTTGCCCAACGTTTGATTAGCTTGTCTCACTCTGGCTCAGCAGCAAGCAGTGCTTTGGCAGCATTCTATACCCGGAATTTCATTGAAAGTTTTCCAGATATTAAGCCGCCTTCATTACAGCTGTTGGTGGCTTTTTGGCAAGATGAAAGTGAACATGTACGTATGGCAGCACGCTCTATATTCCATTGTGCTGCCTCTCATGCTATTCCACTTCCTCTATGCAATTTGAAACCTACTGAACCAACTAATATGAACTCCTCAGCTGGAAGTAGAGGCAAACAGCTGGGAGATACGACACCAGAAAGCATATCTCTTGAGGCAGGAAAACAGCAAATTTCCCAAGACGAGGAATCCAAGATACTTGCTTGGCTAGAATCGTTTGAAGTGCAAGATTGGATTTCTTGTGTTGGGGGAACAAGTCAAGATGCTATGACATCTCGCATTATTGTTGCTGGAGCATTGGCTATCTGGTACCCTAGTCTTGTAAAGCAAAGTCTTGCCACATTAGTTGTTCATCCATTAATGAAGTTGGCTATGGCCATGAATGAGAAGTATAGCTCTACTGCAGCTGAGCTCCTTGCAGAGGGCATGGAAAGTACATGGAAAGAATGCATTATCTCTGAGATACCTCGTCTGATTGGGGATATCTTTTTCCAAGTAGAGTTGAGTGGCCCATCAAGCAATTCAGTGACAGAAATTACAGATGCAGCATTTTCAATTCGAAAGACTTTGGTTGAGGTTCTTCTTCCAAGTTTAGCTATGGCTGATATACCAGGTTTTTTGAATGTAATAGAGAGCCAAATTTGGTCTACTGCATCTGATTCACCTGTCCATTTGGTGTCCCTCTTGACGCTCATAAGGATCATGCGTGGTTCTCCAAGAAATTTGGCTCAGTATCTTGAAAAGGTTGTCAATTTCATTTTACAAACTGTAGATCCTAGCAACTCTGTGATGCGGAAAACATGCTTCCACAGTTCAATGACAACTTTAAAGGAGGTTGTACGTGTATATCCTATGGTTGCTGTCAACGATTCATGGACCAGACTGGCAGTTGGGGATGTGATTGCAGAAGTTAACAATGCTTGCATTAAGGTTTTTGATATGCAAAGTGTGACATTGGTGAAGGTTTTGGACGCAAGTGGGCCTCCTGGACTTCCGAGTCTGCTCACAGCAGCATCAGGAACAATGTTAACCACTGCAATTTCAGCTCTGATCTTCTCTCCTGATGGAGAGGGTCTGGTTGCTTTTTCTGAACATGGGCTAATGATTAGATGGTGGTCTCTGGGATCTGTCTGGTGGGAGAAACTGAGCCGGAACTTTGTTCCTGTCCAGTGCACAAAACTTATCTTTGTTCCTCCTTGGGAGGGATTCTCACCTAATTCATCCAGGTCAAGCATAATTGCCAACATTTTGGAAAATGACAAGCAGTTGAATCTTCAGGAAAATGCGAGGGATTCAAATCATGCGGACTATAGTCATCAGATCAGTTACACTCAGCACTTCCTGTGGGGATTTATTGAAATCCACACAGATGGATTCAGTGCTGCTAGTGATGATGGGATTTTCAGTGATGCTCATCAGTTTTGTGCAGTGCCAAGAGCCAAATTCATTGGTCTCAGTGCAAACTTGAAAGAGGTTTGGCTCTCTTTTTGGTAA 4503 0.4342 MKCRSVACIWSGTPFPHRVTAVAAFTQPPSLFTAGSDGSILWWSLSPQLKAVAILCGHAAPITDLSTCSPVSAEEEEEESYDGGSSSLVVNSSSSSCSALISACSDGFLCVWSRSSGHCRCRRKLPPWVGTPRIIRALPSRPRYVCIACSFMEHSGSPGEGNEVLVDGETTLHRKPPKCSLVIVDTYSLSITHNVFHGNLSIGPIRFMELVLADSDERGHSVLVADSAGKQQIVSISKDPLDRGESLMSSPRDTSQLESSFFSEGLSGVDLVVSVLSYGSIVAFILKDSCIFRLLSSDTAIGEVSFEGSLLCLNGDSSQAHVLGGIFLESDDVRNMPNAHECNNLTLVYFVVWNDIGAAIVYKLSYQNDVFRCEPHSEIPATHYQPDMRSSVSFLQVNHYLVCIKSICFHYEEPLLWRPHITIWSLHDFDDRPGKLYLQCRMISDGVSFADWSGKSTHPGGCDGLETNSTLVATAASEDISNIHTDSINNYYANKGRIVSSSMIISENLLTPYAVVYGFLCGEIELLKFDMFQGIYFDESSSNPDEKSTACRQYFSGHTGAVLCLAAHLMMGNAKGQNLKRVLVSGSMDCTIRIWDLDSNSAVMVMHHHVAPVRQIILPPSSTGHPWSDCFLSVGEDACVALVSLETLRVERMFPGHINYPSKVVWDGARGYIACLCQTHCGTSDASNVLYIWDAKTGSRERVLRGTAAHSMFEHFCKSISMNSISGTLLNGNTSVSSLLLPIVDDARLSNTLLSPSENSLTSSKSSPNISNMTEMSSSKRNAGKGNLAKPTSSPLFSLWSKKLPVKCSCPFPGVVSLSFDLASLMFSYKRNEAVQNGSVESVNINSKQQGAQEQNPESFEGHGLFNLFEEYLLRYSLSFLHLWSVDSELDNLLMSDMKLSKPDNFIVASGLPGDKGSLTLTFPGLSATLELWKSSSEFCAMRSLTMVSLAQRLISLSHSGSAASSALAAFYTRNFIESFPDIKPPSLQLLVAFWQDESEHVRMAARSIFHCAASHAIPLPLCNLKPTEPTNMNSSAGSRGKQLGDTTPESISLEAGKQQISQDEESKILAWLESFEVQDWISCVGGTSQDAMTSRIIVAGALAIWYPSLVKQSLATLVVHPLMKLAMAMNEKYSSTAAELLAEGMESTWKECIISEIPRLIGDIFFQVELSGPSSNSVTEITDAAFSIRKTLVEVLLPSLAMADIPGFLNVIESQIWSTASDSPVHLVSLLTLIRIMRGSPRNLAQYLEKVVNFILQTVDPSNSVMRKTCFHSSMTTLKEVVRVYPMVAVNDSWTRLAVGDVIAEVNNACIKVFDMQSVTLVKVLDASGPPGLPSLLTAASGTMLTTAISALIFSPDGEGLVAFSEHGLMIRWWSLGSVWWEKLSRNFVPVQCTKLIFVPPWEGFSPNSSRSSIIANILENDKQLNLQENARDSNHADYSHQISYTQHFLWGFIEIHTDGFSAASDDGIFSDAHQFCAVPRAKFIGLSANLKEVWLSFW* 1501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3105 1500 SMART WD40_4 548 596 IPR001680 GO:0005515
Aev03g3105 1500 SMART WD40_4 1342 1376 IPR001680 GO:0005515
Aev03g3105 1500 SMART WD40_4 647 694 IPR001680 GO:0005515
Aev03g3105 1500 SMART WD40_4 5 44 IPR001680 GO:0005515
Aev03g3105 1500 SMART WD40_4 48 113 IPR001680 GO:0005515
Aev03g3105 1500 SMART WD40_4 599 644 IPR001680 GO:0005515
Aev03g3105 1500 Gene3D - 522 828 IPR015943 GO:0005515
Aev03g3105 1500 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1428 - -
Aev03g3105 1500 SUPERFAMILY WD40 repeat-like 15 706 IPR036322 GO:0005515
Aev03g3105 1500 MobiDBLite consensus disorder prediction 756 789 - -
Aev03g3105 1500 SUPERFAMILY ARM repeat 963 1290 IPR016024 -
Aev03g3105 1500 Pfam WD domain, G-beta repeat 551 596 IPR001680 GO:0005515
Aev03g3105 1500 ProSiteProfiles Trp-Asp (WD) repeats profile. 583 605 IPR001680 GO:0005515
Aev03g3105 1500 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1428 - -
Aev03g3105 1500 MobiDBLite consensus disorder prediction 1029 1049 - -
Aev03g3105 1500 Gene3D - 3 254 IPR015943 GO:0005515
Aev03g3105 1500 ProSitePatterns Trp-Asp (WD) repeats signature. 583 597 IPR019775 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3105 K24738 - gmx:100816646 2185.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3105 03 29730497 29738454 Aev03g3105 03 29730497 29738454 ECH