Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3092 ATGCATATATATATAACTAGTATTTCTTTCTATGCAAACATACCAATAGCTCAACTTCTGTTCTCCGGGGGAAAAAAAAAAGCTCAGGTCATGGGTGTATTACCATTACTACTAGCTCTTCTGGTTATTGCTTTGGCAAGCCTGAATGTAGTAGAGAGCCGCAGAGCACGAGCTAAGAACTGCTTCCAGTACAGTGCCATGAGCTGCAGAACTTACAGTGCATCACTGACAGATTTTGGAGCTGTTGGAGATGGAACAACTCTCAACACAAAAGCCTTTCAATCAGCCATAGATCATATGAGCCAGTTCTCATCAACTGGTGGCTCCCAACTTTATGTTCCTGCAGGAAAATGGTTAACTGGCAGCTTCAATCTCACTAGTCATTTCACTCTGTTCCTTGACAAGGATGCTGTGATTCTTGCCTCTCAGGATGAGAATGATTGGCCAGTGATTGATCCCTTGCCATCTTATGGTCGAGGGAGGGATGCACAAGGTGGAAGATTTAGCAGTCTGATTTTTGGAACAAACCTCACAGATGTGATCATAACTGGGGACAATGGCACAATAGATGGACAAGGTGATTTGTGGTGGCAAAAATTCCACAAGGGGGAGCTCACATACACACGGCCATACCTGATTGAAATCATGTATTCAGAGAATGTTCAGATATCTCATCTCACTTTGGTCAATTCTCCATCATGGAATGTTCATCCTGTTTATAGCAGCAATGTTGTTGTCCAAGGCATAACCATTCTTGCTCCTGTGAATTCACCAAACACTGATGGGATCAATCCCGATTCATGCACAAATACGCGAATTGAGGACTGCTTCATCGTGTCCGGGGACGACTGTGTGGCGGTTAAGAGCGGTTGGGATGAGTACGGCATAGCTTATGGAATGCCAACAAAGCAACTTGTAATAAGGCGCCTCACGTGTATTTCGCCAACAAGTGCCGTGATTGCCTTAGGGAGTGAGATGTCTGGTGGGATTCAGGATGTGAGGGCAGAGGACATTGTAGCCATCAATTCGGAATCAGGAGTTAGGATCAAAACTGGTGTTGGAAGAGGAGGCTATGTGAAGGACATATATGTTAGAAGAATGACCATGTCCACAATGAAATGGGCATTTTGGATGACAGGGAACTATGGCTCTCATGCTGATGACAAATATGATCCTAATGCTTTGCCTGTGATTCAGAATATCAATTACCGCGATATGGTTGCTGAGAATGTGACTCAGGCAGCAAGGTTGGAAGGTATATCTAATGCTCCATTTACAGGAATATGCATATCCAATGTAACTATTGAACCAGCAAAGAGTGCTAAAAAAGTTCAGTGGGCTTGCACTGATGTTGCTGGGATTACAAGTGGCGTGACACCGGAGCCGTGTGAACTGTTGCCTGATCAGGGGCCAGAGAAGATTGGGGAGTGTACTTTCCCAGAAGAAGGTTTACCCATTGATGATATCAAGGTTCAAACTTGCACTTACAGAAGGAATTCATAA 1503 0.4418 MHIYITSISFYANIPIAQLLFSGGKKKAQVMGVLPLLLALLVIALASLNVVESRRARAKNCFQYSAMSCRTYSASLTDFGAVGDGTTLNTKAFQSAIDHMSQFSSTGGSQLYVPAGKWLTGSFNLTSHFTLFLDKDAVILASQDENDWPVIDPLPSYGRGRDAQGGRFSSLIFGTNLTDVIITGDNGTIDGQGDLWWQKFHKGELTYTRPYLIEIMYSENVQISHLTLVNSPSWNVHPVYSSNVVVQGITILAPVNSPNTDGINPDSCTNTRIEDCFIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVIALGSEMSGGIQDVRAEDIVAINSESGVRIKTGVGRGGYVKDIYVRRMTMSTMKWAFWMTGNYGSHADDKYDPNALPVIQNINYRDMVAENVTQAARLEGISNAPFTGICISNVTIEPAKSAKKVQWACTDVAGITSGVTPEPCELLPDQGPEKIGECTFPEEGLPIDDIKVQTCTYRRNS* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3092 500 PANTHER PECTIN LYASE-RELATED 37 497 - -
Aev03g3092 500 Pfam Glycosyl hydrolases family 28 109 451 IPR000743 GO:0004650|GO:0005975
Aev03g3092 500 PANTHER PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 37 497 - -
Aev03g3092 500 SUPERFAMILY Pectin lyase-like 66 467 IPR011050 -
Aev03g3092 500 Gene3D - 50 457 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3092 Aev-Chr3 29659465 29661497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3092 62 500 Glycoside Hydrolase AT4G23500 73.804 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3092 - - gmx:100785841 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3092 03 29659465 29661497 Aev03g3092 03 29659465 29661497 ECH