Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3085 ATGGGACACGGACACGGCGACAAAGGTCGACCCTTCAAGAAGCAGAAAGGATCAGGGAAATTTGAAGATAGCCGAAGAGGAATCCCGGATGACGATGATGCGTATGGAGGAGGCGAAGAATCATACGACGATGACGATGGCAAGACCAAAGATTTTAGCAAATTAGAGCTGAAACAGGATCACACCAATCGCCCTCTCTGGGCTTGTGGCAATGGCCGCATTTTTCTTGAGACTTTCTCTCCTTTGTACAAGCAAGCTTATGATTTTCTTATTGCTATTGCCGAGCCCGTTTGCAGGCCGGAATCAATGCACGAGTACAACCTTACTCCACACTCGCTGTATGCCGCGGTTTCAGTTGGTCTGGAGACGGAAACAATCATAGCTGTTTTGAACAAGTTATCCAAGACCAAGCTTCCTAAAGAGATGATTAAATTTATACATGATTCCACTGCAAATTATGGCAAGGTGAAGCTGGTGCTTAAGAAGAATCGCTACTTTGTTGAATCTCCATTTCCTGAGGTATTGAAGACACTGCTTAAGGATGATGCTATATCTCGAGCAAGGAAGATTACTTCGGAGGCTACAAATGCAGATGGATTTACAATCAGCAAAGCAGCAGGTGAAATTGAAGGCACTCATGACGAATTGCTAAATGAAGCTGAGGTGGCTGCAGCTGCAGAAGAGAAAGAAGCTCATTCATTTGAAATTGACCCTTCACAGGTTGAAAATGTAAAGCAACGTTGCTTGCCAAATGCATTGAATTATCCCATGTTGGAGGAGTATGACTTCAGAAATGATACTGTGAACCCAGACCTTGACATGGAACTAAAGCCTCAAGCACAGCCACGACCATATCAAGAGAAGAGCCTTAGTAAAATGTTTGGAAATGGTAGAGCAAGATCTGGTATAATAGTTCTACCTTGTGGTGCTGGAAAGTCCCTAGTTGGTGTTTCTGCAGCTTGCCGGATTAAAAAGAGTTGCCTTTGTTTGGCAACAAATGCTGTCTCAGTAGATCAGTGGGCTTTTCAGTTTAAACTTTGGTCAACTATCCGAGAAGAACAAATCTGTCGTTTTACATCTGACAGCAAAGAGAGATTCCGTGGTAATGCTGGAGTTGTTGTGACAACATATAATATGGTTGCTTTTGGTGGTAAACGGTCTGAAGAATCTGAAAAGATCATTGAAGAAATAAGAAACAGAGAATGGGGATTGCTTCTCATGGATGAGGTGCATGTGGTTCCAGCCCATATGTTTCGAAAAGTCATTAGTCTTACTAAATCTCACTGCAAACTTGGGCTTACTGCTACACTTGTAAGAGAAGACGAAAGGATTACAGATCTGAACTTCCTAATTGGCCCCAAGCTGTACGAGGCCAATTGGTTAGATCTAGTAAAAGGTGGATTTATTGCAAATGTACAGTGTGCTGAAGTATGGTGTCCAATGACAAAAGAGTTCTTTGCTGAGTATCTGAAGAAAGAGAATTCCAAGAAGAGGCAGGCACTTTATGTGATGAATCCTAATAAATTTAGAGCTTGTGAGTTTCTCATAAATTACCATGAAAGGGCACGTGGTGATAAAATTATTGTCTTTGCTGATAATCTTTTTGCTCTCACCGAGTATGCCATGAAACTTCGCAAACCAATGATATATGGTGCAACAAGCCATGTTGAGAGGACAAAGATTCTACAAGCATTCAAAACTAGCAAAGACGTGAACACTATTTTTCTTTCCAAGGTTGGTGACAACTCAATCGATATTCCAGAAGCAAATGTGATTATTCAAATCTCATCACATGCTGGTTCAAGGCGTCAAGAAGCCCAACGTCTTGGTCGTATTCTTAGGGCAAAGGGGAAGCTTCAGGATAGGATGGCTGGGGGTAAAGAGGAGTATAATGCATTTTTTTATTCCCTTGTGTCAACTGATACCCAGGAAATGTATTACTCAACTAAGAGGCAGCAATTTTTAATTGATCAGGGTTATAGCTTTAAGGTAATTACAAGCCTGCCTCCGTCTGATGAAGGACCTAGTTTGAGCTATTATCATCTTGAGGATCAACTGGCACTTCTTGCAAAGGTATTGAGTGCTGGTGATGATGCAGTCGGATTAGAACAGCTAGAGGAAGATACAGATGAAATAGCTCTTAATAGTGCCCGTCGTTCTCAAGCATCTATGAGTGCAATGTCAGGTGCCAAAGGAATGGTTTACATGGAGTACAGTACTGGGCGTAACAAAGGCCATCCACAGATTAAGAGCAAGCCGAAAGATCCATCAAAGAGACACTACTTGTTTAAAAAGCGATTTGGTCCAACCTGA 2313 0.4198 MGHGHGDKGRPFKKQKGSGKFEDSRRGIPDDDDAYGGGEESYDDDDGKTKDFSKLELKQDHTNRPLWACGNGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLNKLSKTKLPKEMIKFIHDSTANYGKVKLVLKKNRYFVESPFPEVLKTLLKDDAISRARKITSEATNADGFTISKAAGEIEGTHDELLNEAEVAAAAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKRQALYVMNPNKFRACEFLINYHERARGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPSDEGPSLSYYHLEDQLALLAKVLSAGDDAVGLEQLEEDTDEIALNSARRSQASMSAMSGAKGMVYMEYSTGRNKGHPQIKSKPKDPSKRHYLFKKRFGPT* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3085 770 SMART helicmild6 538 616 IPR001650 -
Aev03g3085 770 Pfam ERCC3/RAD25/XPB C-terminal helicase 463 711 IPR032438 -
Aev03g3085 770 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 510 676 IPR001650 -
Aev03g3085 770 Pfam Helicase conserved C-terminal domain 66 188 IPR032830 -
Aev03g3085 770 PANTHER RAD25/XP-B DNA REPAIR HELICASE 48 767 - -
Aev03g3085 770 PANTHER DNA REPAIR HELICASE XPB1-LIKE 48 767 - -
Aev03g3085 770 PRINTS Xeroderma pigmentosum group B protein signature 263 289 - -
Aev03g3085 770 PRINTS Xeroderma pigmentosum group B protein signature 572 590 - -
Aev03g3085 770 PRINTS Xeroderma pigmentosum group B protein signature 64 84 - -
Aev03g3085 770 PRINTS Xeroderma pigmentosum group B protein signature 525 547 - -
Aev03g3085 770 PRINTS Xeroderma pigmentosum group B protein signature 628 651 - -
Aev03g3085 770 PRINTS Xeroderma pigmentosum group B protein signature 467 489 - -
Aev03g3085 770 PRINTS Xeroderma pigmentosum group B protein signature 719 738 - -
Aev03g3085 770 PRINTS Xeroderma pigmentosum group B protein signature 401 421 - -
Aev03g3085 770 PRINTS Xeroderma pigmentosum group B protein signature 150 169 - -
Aev03g3085 770 PRINTS Xeroderma pigmentosum group B protein signature 294 316 - -
Aev03g3085 770 PRINTS Xeroderma pigmentosum group B protein signature 505 520 - -
Aev03g3085 770 PRINTS Xeroderma pigmentosum group B protein signature 591 616 - -
Aev03g3085 770 MobiDBLite consensus disorder prediction 1 33 - -
Aev03g3085 770 TIGRFAM rad25: DNA repair helicase rad25 51 765 IPR001161 GO:0003678|GO:0006289|GO:0006367
Aev03g3085 770 CDD DEXHc_XPB 274 443 - -
Aev03g3085 770 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 241 457 IPR027417 -
Aev03g3085 770 Pfam Type III restriction enzyme, res subunit 281 437 IPR006935 GO:0003677|GO:0005524|GO:0016787
Aev03g3085 770 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 391 712 IPR027417 -
Aev03g3085 770 SMART ultradead3 278 459 IPR014001 -
Aev03g3085 770 Coils Coil 217 237 - -
Aev03g3085 770 MobiDBLite consensus disorder prediction 1 49 - -
Aev03g3085 770 MobiDBLite consensus disorder prediction 740 770 - -
Aev03g3085 770 CDD SF2_C_XPB 474 638 - -
Aev03g3085 770 Gene3D - 272 463 IPR027417 -
Aev03g3085 770 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 293 455 IPR014001 -
Aev03g3085 770 Gene3D - 464 705 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3085 K10843 - gmx:100789550 1372.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3085 03 29585440 29591705 Aev03g3085 03 29585440 29591705 ECH